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Pull request #280 opened
16:42:53 Connecting to https://api.github.com using 476720/******
Obtained ci/jenkins_config from 51dd5ea7011aaf927ee4e782c204020113b8b9e9+8c28e5937fcd727bbb358580ed9b88e8fa5da3d4 (1e78e836b1b465f2df63a2e18677395794e9158d)
[Pipeline] Start of Pipeline
[Pipeline] withEnv
[Pipeline] {
[Pipeline] timeout
Timeout set to expire in 6 hr 0 min
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[Pipeline] stage
[Pipeline] { (Test)
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[Pipeline] { (Branch: CPU)
[Pipeline] { (Branch: CUDA)
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Running on lascaux04 in /var/jenkins/workspace/adamantine_PR-280
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential Jenkins ORNL
Cloning the remote Git repository
Cloning with configured refspecs honoured and without tags
Cloning repository https://github.com/adamantine-sim/adamantine.git
 > git init /var/jenkins/workspace/adamantine_PR-280 # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git
 > git --version # timeout=10
 > git --version # 'git version 2.17.1'
using GIT_ASKPASS to set credentials 
 > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/pull/280/head:refs/remotes/origin/PR-280 +refs/heads/master:refs/remotes/origin/master # timeout=10
Fetching without tags
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10
 > git config --add remote.origin.fetch +refs/pull/280/head:refs/remotes/origin/PR-280 # timeout=10
 > git config --add remote.origin.fetch +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git
using GIT_ASKPASS to set credentials 
 > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/pull/280/head:refs/remotes/origin/PR-280 +refs/heads/master:refs/remotes/origin/master # timeout=10
Merging remotes/origin/master commit 8c28e5937fcd727bbb358580ed9b88e8fa5da3d4 into PR head commit 51dd5ea7011aaf927ee4e782c204020113b8b9e9
Merge succeeded, producing 3cbf03af569f13f906bc092bf9c72e85a1a5c7cb
Checking out Revision 3cbf03af569f13f906bc092bf9c72e85a1a5c7cb (PR-280)
Commit message: "Merge commit '8c28e5937fcd727bbb358580ed9b88e8fa5da3d4' into HEAD"
First time build. Skipping changelog.
 > git config core.sparsecheckout # timeout=10
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using GIT_ASKPASS to set credentials 
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 > git config core.sparsecheckout # timeout=10
 > git checkout -f 3cbf03af569f13f906bc092bf9c72e85a1a5c7cb # timeout=10
[Pipeline] withEnv
[Pipeline] {
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+ docker pull rombur/adamantine-stack:no_gpu-latest
no_gpu-latest: Pulling from rombur/adamantine-stack
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Still waiting to schedule task
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Digest: sha256:f852740a2e8f8902a8b7589345cdb820b7a112b4d6ffe3884ff0acee441e25f0
Status: Downloaded newer image for rombur/adamantine-stack:no_gpu-latest
docker.io/rombur/adamantine-stack:no_gpu-latest
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
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+ docker inspect -f . rombur/adamantine-stack:no_gpu-latest
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
lascaux04 seems to be running inside container 1e8dadd3a9ba66526efced96d326f007c9cbf7d4278985a492aec48b2cc04a19
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_PR-280 --volumes-from 1e8dadd3a9ba66526efced96d326f007c9cbf7d4278985a492aec48b2cc04a19 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:no_gpu-latest cat
$ docker top f61fc804a82a91a558a27179cc990cc1f88a9b38d2b716876df185cccf9bf724 -eo pid,comm
[Pipeline] {
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+ rm -rf build
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Running in /var/jenkins/workspace/adamantine_PR-280/build
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-- Using the deal.II-9.5.1 installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
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-- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /opt/boost/lib/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Found Adiak: /opt/adiak
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Found Caliper: /opt/caliper
-- Build type: Debug
-- Configuring done (0.6s)
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-- Build files have been written to: /var/jenkins/workspace/adamantine_PR-280/build
[Pipeline] sh
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      |       ~~~~~~~~^~~~
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[ 76%] Building CXX object tests/CMakeFiles/test_timer.dir/test_timer.cc.o
[ 76%] Linking CXX executable ../bin/test_mechanical_physics
[ 76%] Built target test_mechanical_operator
[ 76%] Building CXX object tests/CMakeFiles/test_utils.dir/test_utils.cc.o
[ 77%] Linking CXX executable ../bin/test_timer
[ 78%] Linking CXX executable ../bin/test_utils
[ 78%] Built target test_mechanical_physics
[ 79%] Building CXX object tests/CMakeFiles/test_validate_input_database.dir/test_validate_input_database.cc.o
[ 79%] Built target test_timer
[ 79%] Building CXX object tests/CMakeFiles/test_experimental_data.dir/test_experimental_data.cc.o
[ 79%] Built target test_utils
[ 80%] Building CXX object tests/CMakeFiles/test_integration_2d.dir/test_integration_2d.cc.o
[ 81%] Linking CXX executable ../bin/test_post_processor
[ 81%] Linking CXX executable ../bin/test_thermal_physics_device
[ 81%] Linking CXX executable ../bin/test_thermal_operator_device
[ 81%] Built target test_post_processor
[ 82%] Building CXX object tests/CMakeFiles/test_integration_2d_device.dir/test_integration_2d_device.cc.o
[ 83%] Linking CXX executable ../bin/test_validate_input_database
[ 84%] Linking CXX executable ../bin/test_thermal_operator
[ 84%] Built target test_thermal_physics_device
[ 85%] Building CXX object tests/CMakeFiles/test_integration_3d.dir/test_integration_3d.cc.o
[ 85%] Built target test_validate_input_database
[ 85%] Building CXX object tests/CMakeFiles/test_integration_3d_amr.dir/test_integration_3d_amr.cc.o
[ 86%] Linking CXX executable ../bin/test_experimental_data
[ 86%] Built target test_thermal_operator
[ 87%] Building CXX object tests/CMakeFiles/test_integration_3d_amr_device.dir/test_integration_3d_amr_device.cc.o
[ 87%] Built target test_thermal_operator_device
[ 88%] Building CXX object tests/CMakeFiles/test_integration_da_augmented.dir/test_integration_da_augmented.cc.o
[ 88%] Built target test_experimental_data
[ 89%] Building CXX object tests/CMakeFiles/test_material_deposition.dir/test_material_deposition.cc.o
[ 90%] Linking CXX executable ../bin/test_integration_2d
[ 90%] Linking CXX executable ../bin/test_integration_2d_device
[ 91%] Linking CXX executable ../bin/test_integration_3d
[ 92%] Linking CXX executable ../bin/test_material_deposition
[ 93%] Linking CXX executable ../bin/test_integration_3d_amr_device
[ 94%] Linking CXX executable ../bin/test_integration_3d_amr
[ 94%] Built target test_integration_2d
[ 95%] Building CXX object tests/CMakeFiles/test_thermal_physics.dir/test_thermal_physics.cc.o
[ 96%] Linking CXX executable ../bin/test_integration_da_augmented
[ 96%] Built target test_integration_2d_device
[ 97%] Building CXX object tests/CMakeFiles/test_ensemble_management.dir/test_ensemble_management.cc.o
[ 97%] Built target test_material_deposition
[ 97%] Built target test_integration_3d_amr_device
[ 97%] Built target test_integration_3d
[ 97%] Built target test_integration_3d_amr
[ 97%] Built target test_integration_da_augmented
[ 98%] Linking CXX executable ../bin/test_ensemble_management
[ 99%] Linking CXX executable ../bin/adamantine
[ 99%] Built target test_ensemble_management
[100%] Linking CXX executable ../bin/test_thermal_physics
[100%] Built target test_thermal_physics
[100%] Built target adamantine
[Pipeline] sh
+ ctest --no-compress-output -R test_ -T Test
   Site: f61fc804a82a
   Build name: Linux-c++
Create new tag: 20240430-2046 - Experimental
Test project /var/jenkins/workspace/adamantine_PR-280/build
      Start  2: test_integration_da_1
 1/43 Test  #2: test_integration_da_1 ..............   Passed  127.18 sec
      Start  3: test_integration_da_2
 2/43 Test  #3: test_integration_da_2 ..............   Passed  110.72 sec
      Start  4: test_integration_da_3
 3/43 Test  #4: test_integration_da_3 ..............   Passed   92.48 sec
      Start  5: test_integration_da_6
 4/43 Test  #5: test_integration_da_6 ..............   Passed   84.36 sec
      Start  6: test_data_assimilator_1
 5/43 Test  #6: test_data_assimilator_1 ............   Passed    0.46 sec
      Start  7: test_geometry_1
 6/43 Test  #7: test_geometry_1 ....................   Passed    0.46 sec
      Start  8: test_heat_source_1
 7/43 Test  #8: test_heat_source_1 .................   Passed    0.28 sec
      Start  9: test_implicit_operator_1
 8/43 Test  #9: test_implicit_operator_1 ...........   Passed    0.32 sec
      Start 10: test_integration_3d_device_1
 9/43 Test #10: test_integration_3d_device_1 .......   Passed  490.62 sec
      Start 11: test_integration_thermoelastic_1
10/43 Test #11: test_integration_thermoelastic_1 ...   Passed  246.38 sec
      Start 12: test_material_property_1
11/43 Test #12: test_material_property_1 ...........   Passed    0.36 sec
      Start 13: test_material_property_device_1
12/43 Test #13: test_material_property_device_1 ....   Passed    0.34 sec
      Start 14: test_mechanical_operator_1
13/43 Test #14: test_mechanical_operator_1 .........   Passed   13.38 sec
      Start 15: test_mechanical_physics_1
14/43 Test #15: test_mechanical_physics_1 ..........   Passed   55.15 sec
      Start 16: test_newton_solver_1
15/43 Test #16: test_newton_solver_1 ...............   Passed    0.29 sec
      Start 17: test_post_processor_1
16/43 Test #17: test_post_processor_1 ..............   Passed    3.42 sec
      Start 18: test_scan_path_1
17/43 Test #18: test_scan_path_1 ...................   Passed    0.29 sec
      Start 19: test_thermal_operator_1
18/43 Test #19: test_thermal_operator_1 ............   Passed    2.72 sec
      Start 20: test_thermal_operator_device_1
19/43 Test #20: test_thermal_operator_device_1 .....   Passed    1.98 sec
      Start 21: test_thermal_physics_device_1
20/43 Test #21: test_thermal_physics_device_1 ......   Passed   27.55 sec
      Start 22: test_timer_1
21/43 Test #22: test_timer_1 .......................   Passed    0.89 sec
      Start 23: test_utils_1
22/43 Test #23: test_utils_1 .......................   Passed    0.26 sec
      Start 24: test_validate_input_database_1
23/43 Test #24: test_validate_input_database_1 .....   Passed    0.28 sec
      Start 25: test_experimental_data_1
24/43 Test #25: test_experimental_data_1 ...........   Passed   11.71 sec
      Start 26: test_experimental_data_2
25/43 Test #26: test_experimental_data_2 ...........   Passed    0.30 sec
      Start 27: test_integration_2d_1
26/43 Test #27: test_integration_2d_1 ..............   Passed    9.22 sec
      Start 28: test_integration_2d_2
27/43 Test #28: test_integration_2d_2 ..............   Passed    6.05 sec
      Start 29: test_integration_2d_device_1
28/43 Test #29: test_integration_2d_device_1 .......   Passed    4.48 sec
      Start 30: test_integration_2d_device_2
29/43 Test #30: test_integration_2d_device_2 .......   Passed    2.53 sec
      Start 31: test_integration_3d_1
30/43 Test #31: test_integration_3d_1 ..............   Passed  251.13 sec
      Start 32: test_integration_3d_2
31/43 Test #32: test_integration_3d_2 ..............   Passed  138.99 sec
      Start 33: test_integration_3d_amr_1
32/43 Test #33: test_integration_3d_amr_1 ..........   Passed  152.63 sec
      Start 34: test_integration_3d_amr_2
33/43 Test #34: test_integration_3d_amr_2 ..........   Passed   86.89 sec
      Start 35: test_integration_3d_amr_device_1
34/43 Test #35: test_integration_3d_amr_device_1 ...   Passed  124.12 sec
      Start 36: test_integration_3d_amr_device_2
35/43 Test #36: test_integration_3d_amr_device_2 ...   Passed   62.43 sec
      Start 37: test_integration_da_augmented_1
36/43 Test #37: test_integration_da_augmented_1 ....   Passed   39.40 sec
      Start 38: test_integration_da_augmented_2
37/43 Test #38: test_integration_da_augmented_2 ....   Passed   28.33 sec
      Start 39: test_material_deposition_1
38/43 Test #39: test_material_deposition_1 .........   Passed   14.95 sec
      Start 40: test_material_deposition_2
39/43 Test #40: test_material_deposition_2 .........   Passed   10.02 sec
      Start 41: test_thermal_physics_1
40/43 Test #41: test_thermal_physics_1 .............   Passed   20.08 sec
      Start 42: test_thermal_physics_2
41/43 Test #42: test_thermal_physics_2 .............   Passed   13.02 sec
      Start 43: test_ensemble_management_1
42/43 Test #43: test_ensemble_management_1 .........   Passed    0.30 sec
      Start 44: test_ensemble_management_2
43/43 Test #44: test_ensemble_management_2 .........   Passed    0.29 sec

100% tests passed, 0 tests failed out of 43

Total Test time (real) = 2237.07 sec
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
$ docker stop --time=1 f61fc804a82a91a558a27179cc990cc1f88a9b38d2b716876df185cccf9bf724
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_PR-280' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes f61fc804a82a91a558a27179cc990cc1f88a9b38d2b716876df185cccf9bf724
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Cancelling nested steps due to timeout
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CUDA
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] End of Pipeline
Timeout has been exceeded
org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: b481d3c9-e20b-46e6-893e-cdda5e367f80

GitHub has been notified of this commit’s build result

Finished: ABORTED