Pull request #253 updated 11:55:34 Connecting to https://api.github.com using 476720/****** Obtained ci/jenkins_config from eae17ac34d26f7067e65904bf24c9f4942f0549c+0f68aba9f71727941160eef5844272f44c9e232b (0b187a78c7e99a77a58e69e8eaa3113faba12985) [Pipeline] Start of Pipeline [Pipeline] withEnv [Pipeline] { [Pipeline] timeout Timeout set to expire in 6 hr 0 min [Pipeline] { [Pipeline] stage [Pipeline] { (Test) [Pipeline] parallel [Pipeline] { (Branch: CPU) [Pipeline] { (Branch: CUDA) [Pipeline] stage [Pipeline] { (CPU) [Pipeline] stage [Pipeline] { (CUDA) [Pipeline] node Running on CpuNode6 in /var/jenkins/workspace/adamantine_PR-253 [Pipeline] node [Pipeline] { [Pipeline] checkout Selected Git installation does not exist. Using Default The recommended git tool is: NONE using credential Jenkins ORNL Fetching changes from the remote Git repository Fetching without tags > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine_PR-253/.git # timeout=10 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10 Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git > git --version # timeout=10 > git --version # 'git version 2.17.1' using GIT_ASKPASS to set credentials > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/pull/253/head:refs/remotes/origin/PR-253 +refs/heads/master:refs/remotes/origin/master # timeout=10 Merging remotes/origin/master commit 0f68aba9f71727941160eef5844272f44c9e232b into PR head commit eae17ac34d26f7067e65904bf24c9f4942f0549c Merge succeeded, producing eae17ac34d26f7067e65904bf24c9f4942f0549c Checking out Revision eae17ac34d26f7067e65904bf24c9f4942f0549c (PR-253) Commit message: "Add missing include" > git config core.sparsecheckout # timeout=10 > git checkout -f eae17ac34d26f7067e65904bf24c9f4942f0549c # timeout=10 > git remote # timeout=10 > git config --get remote.origin.url # timeout=10 using GIT_ASKPASS to set credentials > git merge 0f68aba9f71727941160eef5844272f44c9e232b # timeout=10 > git rev-parse HEAD^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f eae17ac34d26f7067e65904bf24c9f4942f0549c # timeout=10 > git rev-list --no-walk 3c447ca57b67abcf0df28260cf082050b246369a # timeout=10 [Pipeline] withEnv [Pipeline] { [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker pull rombur/adamantine-stack:no_gpu-latest no_gpu-latest: Pulling from rombur/adamantine-stack Digest: sha256:8e2b1014dc4112cf7e1d6ba1c44601bfc036fc0c743a5a5ff0d64e43d757f4f1 Status: Image is up to date for rombur/adamantine-stack:no_gpu-latest docker.io/rombur/adamantine-stack:no_gpu-latest [Pipeline] } [Pipeline] // withEnv [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker inspect -f . rombur/adamantine-stack:no_gpu-latest . [Pipeline] } [Pipeline] // withEnv [Pipeline] withDockerContainer CpuNode6 seems to be running inside container 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226 $ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_PR-253 --volumes-from 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:no_gpu-latest cat $ docker top 256b4571387f1cc8110dfc9545cae7893a525a34d629a5e46209e35f02b8e729 -eo pid,comm [Pipeline] { [Pipeline] sh + rm -rf build + mkdir -p build [Pipeline] dir Running in /var/jenkins/workspace/adamantine_PR-253/build [Pipeline] { [Pipeline] sh -- Using the deal.II-9.5.0-pre installation found at /opt/dealii -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake -- The CXX compiler identification is GNU 11.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found Boost: /opt/boost/lib/cmake/Boost-1.80.0/BoostConfig.cmake (found suitable version "1.80.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework -- Build type: Debug -- Configuring done -- Generating done -- Build files have been written to: /var/jenkins/workspace/adamantine_PR-253/build [Pipeline] sh + make -j4 [ 1%] Copying demo_316_short.info [ 2%] Copying demo_316_short_anisotropic.info [ 3%] Copying amr_test.info [ 3%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o [ 3%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_demo_316_short.info [ 3%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_amr_test.info [ 3%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_demo_316_short_anisotropic.info [ 4%] Copying demo_316_short_scan_path.txt [ 4%] Copying experimental_data_0_0.csv [ 5%] Copying extruded_cube.msh [ 5%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_demo_316_short_scan_path.txt [ 5%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_experimental_data_0_0.csv [ 5%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_extruded_cube.msh [ 6%] Copying integration_2d.info [ 7%] Copying integration_2d_ensemble.info [ 7%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_2d.info [ 7%] Copying integration_2d_gold.txt [ 7%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_2d_ensemble.info [ 8%] Copying integration_3d_gold.txt [ 8%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_2d_gold.txt [ 8%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_3d_gold.txt [ 9%] Copying integration_3d_gold_1.txt [ 10%] Copying integration_3d_gold_0.txt [ 10%] Copying material_deposition_2d.txt [ 10%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_3d_gold_0.txt [ 10%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_3d_gold_1.txt [ 11%] Copying material_deposition_3d.txt [ 12%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_material_deposition_2d.txt [ 12%] Copying material_path_test_material_deposition.txt [ 12%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_material_deposition_3d.txt [ 12%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_material_path_test_material_deposition.txt [ 12%] Copying raytracing_experimental_data_0_0.csv [ 13%] Copying scan_path.txt [ 14%] Copying scan_path_diagonal.txt [ 14%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_raytracing_experimental_data_0_0.csv [ 14%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_scan_path.txt [ 14%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_scan_path_diagonal.txt [ 15%] Copying scan_path_event_series.inp [ 16%] Copying scan_path_test_thermal_physics.txt [ 17%] Copying scan_path_L.txt [ 17%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_scan_path_event_series.inp [ 17%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_scan_path_test_thermal_physics.txt [ 17%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_scan_path_L.txt [ 17%] Copying scan_path_layers.txt [ 18%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o [ 19%] Copying bare_plate_L_ensemble.info [ 19%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_scan_path_layers.txt [ 19%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_ensemble.info [ 20%] Copying bare_plate_L_da.info [ 21%] Copying bare_plate_L_scan_path.txt [ 21%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_da.info [ 21%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_scan_path.txt [ 21%] Copying bare_plate_L_scan_path_fast.txt [ 22%] Copying bare_plate_L_expt_log.txt [ 22%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_scan_path_fast.txt [ 22%] Copying bare_plate_L_expt_data_0_0.csv [ 22%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_expt_log.txt [ 22%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_expt_data_0_0.csv [ 23%] Copying bare_plate_L_expt_data_0_1.csv [ 24%] Copying experiment_log_test.txt [ 24%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_expt_data_0_1.csv [ 24%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_experiment_log_test.txt [ 25%] Copying bare_plate_L_da_aug_ref_log.txt [ 25%] Copying bare_plate_L_da_aug_ref_data_0_0.csv [ 25%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_da_aug_ref_log.txt [ 25%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv [ 26%] Copying bare_plate_L_da_aug_ref_data_0_1.csv [ 27%] Copying bare_plate_L_da_augmented.info [ 27%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv [ 28%] Copying thermoelastic_bare_plate.info [ 28%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_bare_plate_L_da_augmented.info [ 28%] Copying thermoelastic_bare_plate_scan_path.txt [ 28%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_thermoelastic_bare_plate.info [ 28%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_thermoelastic_bare_plate_scan_path.txt [ 29%] Building CXX object source/CMakeFiles/Adamantine.dir/DataAssimilator.cc.o [ 30%] Copying rays_cam-0-0_test_full.csv [ 30%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_rays_cam-0-0_test_full.csv [ 31%] Copying thermoelastic_bare_plate_add_material_scan_path.txt [ 31%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_thermoelastic_bare_plate_add_material_scan_path.txt [ 31%] Copying integration_da_add_material.info [ 31%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_da_add_material.info [ 32%] Copying integration_da_add_material_expt_log.txt [ 32%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_da_add_material_expt_log.txt [ 33%] Copying integration_da_add_material_expt_pc_0_0.csv [ 33%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_da_add_material_expt_pc_0_0.csv [ 34%] Copying integration_da_add_material_sp.txt [ 34%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_da_add_material_sp.txt [ 35%] Copying integration_da_add_material_expt_ray_0_0.csv [ 35%] Built target _var_jenkins_workspace_adamantine_PR-253_build_bin_integration_da_add_material_expt_ray_0_0.csv [ 36%] Building CXX object source/CMakeFiles/Adamantine.dir/ElectronBeamHeatSource.cc.o In file included from /var/jenkins/workspace/adamantine_PR-253/source/BodyForce.cc:9: /var/jenkins/workspace/adamantine_PR-253/source/MaterialProperty.hh:27:10: fatal error: Kokkos_core.hpp: No such file or directory 27 | #include <Kokkos_core.hpp> | ^~~~~~~~~~~~~~~~~ compilation terminated. make[2]: *** [source/CMakeFiles/Adamantine.dir/build.make:76: source/CMakeFiles/Adamantine.dir/BodyForce.cc.o] Error 1 make[2]: *** Waiting for unfinished jobs.... Still waiting to schedule task Waiting for next available executor on ‘nvidia-docker&&volta’ make[1]: *** [CMakeFiles/Makefile2:1087: source/CMakeFiles/Adamantine.dir/all] Error 2 make: *** [Makefile:101: all] Error 2 [Pipeline] } [Pipeline] // dir Post stage [Pipeline] xunit INFO: Processing CTest-Version 3.x (default) Error when executing always post condition: Also: hudson.remoting.Channel$CallSiteStackTrace: Remote call to JNLP4-connect connection from 10.64.193.57/10.64.193.57:34566 at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1787) at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:356) at hudson.remoting.Channel.call(Channel.java:1003) at hudson.FilePath.act(FilePath.java:1230) at hudson.FilePath.act(FilePath.java:1219) at org.jenkinsci.plugins.xunit.XUnitProcessor.processTestsReport(XUnitProcessor.java:212) at org.jenkinsci.plugins.xunit.XUnitProcessor.process(XUnitProcessor.java:161) at org.jenkinsci.plugins.xunit.pipeline.XUnitResultsStepExecution.run(XUnitResultsStepExecution.java:93) at org.jenkinsci.plugins.xunit.pipeline.XUnitResultsStepExecution.run(XUnitResultsStepExecution.java:52) at org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution.lambda$start$0(SynchronousNonBlockingStepExecution.java:47) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) at java.base/java.lang.Thread.run(Thread.java:840) Also: org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: d097c01f-71c8-4b0a-9401-2d7d65c1d4f3 org.jenkinsci.plugins.xunit.service.NoTestFoundException: [CTest-Version 3.x (default)] - No test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_PR-253' for the testing framework 'CTest-Version 3.x (default)'. Did you enter a pattern relative to (and within) the workspace directory? Did you generate the result report(s) for 'CTest-Version 3.x (default)'?" at org.jenkinsci.plugins.xunit.service.XUnitReportProcessorService.findReports(XUnitReportProcessorService.java:77) at org.jenkinsci.plugins.xunit.service.XUnitTransformerCallable.invoke(XUnitTransformerCallable.java:85) at org.jenkinsci.plugins.xunit.service.XUnitTransformerCallable.invoke(XUnitTransformerCallable.java:38) at hudson.FilePath$FileCallableWrapper.call(FilePath.java:3616) at hudson.remoting.UserRequest.perform(UserRequest.java:211) at hudson.remoting.UserRequest.perform(UserRequest.java:54) at hudson.remoting.Request$2.run(Request.java:377) at hudson.remoting.InterceptingExecutorService.lambda$wrap$0(InterceptingExecutorService.java:78) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) at hudson.remoting.Engine$1.lambda$newThread$0(Engine.java:125) at java.base/java.lang.Thread.run(Thread.java:829) [Pipeline] } $ docker stop --time=1 256b4571387f1cc8110dfc9545cae7893a525a34d629a5e46209e35f02b8e729 $ docker rm -f --volumes 256b4571387f1cc8110dfc9545cae7893a525a34d629a5e46209e35f02b8e729 [Pipeline] // withDockerContainer [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] } [Pipeline] // stage [Pipeline] } Failed in branch CPU Superseded by #6 [Pipeline] // node [Pipeline] } [Pipeline] // stage [Pipeline] } Failed in branch CUDA [Pipeline] // parallel [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // timeout [Pipeline] } [Pipeline] // withEnv [Pipeline] End of Pipeline ERROR: script returned exit code 2 GitHub has been notified of this commit’s build result Finished: NOT_BUILT