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Push event to branch master 14:04:08 Connecting to https://api.github.com using 476720/****** Obtained ci/jenkins_config from 2c27da471c322e051cbf92ce8ad7977650ec139e [Pipeline] Start of Pipeline [Pipeline] withEnv [Pipeline] { [Pipeline] timeout Timeout set to expire in 6 hr 0 min [Pipeline] { [Pipeline] stage [Pipeline] { (Test) [Pipeline] parallel [Pipeline] { (Branch: CPU) [Pipeline] { (Branch: CUDA) [Pipeline] stage [Pipeline] { (CPU) [Pipeline] stage [Pipeline] { (CUDA) [Pipeline] node Running on fetnat05 in /var/jenkins/workspace/adamantine_master [Pipeline] node [Pipeline] { [Pipeline] checkout Selected Git installation does not exist. Using Default The recommended git tool is: NONE using credential Jenkins ORNL Cloning the remote Git repository Cloning with configured refspecs honoured and without tags Cloning repository https://github.com/adamantine-sim/adamantine.git > git init /var/jenkins/workspace/adamantine_master # timeout=10 Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git > git --version # timeout=10 > git --version # 'git version 2.17.1' using GIT_ASKPASS to set credentials > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/heads/master:refs/remotes/origin/master # timeout=10 Avoid second fetch Checking out Revision 2c27da471c322e051cbf92ce8ad7977650ec139e (master) > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/master:refs/remotes/origin/master # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2c27da471c322e051cbf92ce8ad7977650ec139e # timeout=10 Commit message: "Merge pull request #290 from Rombur/missing_doc" > git rev-list --no-walk a5937bef4d4b49dc36267efc8f0a18c9f8c4d81b # timeout=10 [Pipeline] withEnv [Pipeline] { [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker pull rombur/adamantine-stack:no_gpu-latest no_gpu-latest: Pulling from rombur/adamantine-stack 29202e855b20: Pulling fs layer 1d9856108d34: Pulling fs layer de43ae72d936: Pulling fs layer dae96d2bbf9b: Pulling fs layer beca17b9beb1: Pulling fs layer 86cd2a2d00dc: Pulling fs layer a435b5bfc773: Pulling fs layer 62dc13d7461f: Pulling fs layer 6fc4be036e8d: Pulling fs layer 4822cd1726d3: Pulling fs layer 908cdf54da43: Pulling fs layer dcffb26b88f8: Pulling fs layer 6078eca873c0: Pulling fs layer b77e7fd3d0dd: Pulling fs layer beca17b9beb1: Waiting 86cd2a2d00dc: Waiting 6fc4be036e8d: Waiting a435b5bfc773: Waiting 4822cd1726d3: Waiting 62dc13d7461f: Waiting 908cdf54da43: Waiting dcffb26b88f8: Waiting 6078eca873c0: Waiting b77e7fd3d0dd: Waiting dae96d2bbf9b: Waiting de43ae72d936: Download complete 29202e855b20: Verifying Checksum 29202e855b20: Download complete dae96d2bbf9b: Verifying Checksum dae96d2bbf9b: Download complete beca17b9beb1: Verifying Checksum beca17b9beb1: Download complete a435b5bfc773: Verifying Checksum a435b5bfc773: Download complete 86cd2a2d00dc: Download complete 6fc4be036e8d: Verifying Checksum 6fc4be036e8d: Download complete 62dc13d7461f: Verifying Checksum 62dc13d7461f: Download complete 908cdf54da43: Download complete 4822cd1726d3: Verifying Checksum 4822cd1726d3: Download complete dcffb26b88f8: Verifying Checksum dcffb26b88f8: Download complete 6078eca873c0: Verifying Checksum 6078eca873c0: Download complete 29202e855b20: Pull complete 1d9856108d34: Verifying Checksum 1d9856108d34: Download complete b77e7fd3d0dd: Verifying Checksum b77e7fd3d0dd: Download complete Still waiting to schedule task Waiting for next available executor on ‘nvidia-docker&&ere’ 1d9856108d34: Pull complete de43ae72d936: Pull complete dae96d2bbf9b: Pull complete beca17b9beb1: Pull complete 86cd2a2d00dc: Pull complete a435b5bfc773: Pull complete 62dc13d7461f: Pull complete 6fc4be036e8d: Pull complete 4822cd1726d3: Pull complete 908cdf54da43: Pull complete dcffb26b88f8: Pull complete 6078eca873c0: Pull complete b77e7fd3d0dd: Pull complete Digest: sha256:f852740a2e8f8902a8b7589345cdb820b7a112b4d6ffe3884ff0acee441e25f0 Status: Downloaded newer image for rombur/adamantine-stack:no_gpu-latest docker.io/rombur/adamantine-stack:no_gpu-latest [Pipeline] } [Pipeline] // withEnv [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker inspect -f . rombur/adamantine-stack:no_gpu-latest . [Pipeline] } [Pipeline] // withEnv [Pipeline] withDockerContainer fetnat05 seems to be running inside container 6f56bc156060384f4e853d69ba2c4279b68b846a4462c1523c74aab406a239df $ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_master --volumes-from 6f56bc156060384f4e853d69ba2c4279b68b846a4462c1523c74aab406a239df -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:no_gpu-latest cat $ docker top 163ea70a8245f66c44e51dcefa3b794acdd0528a86f33186a0de27f3f638b22a -eo pid,comm [Pipeline] { [Pipeline] sh + rm -rf build + mkdir -p build [Pipeline] dir Running in /var/jenkins/workspace/adamantine_master/build [Pipeline] { [Pipeline] sh -- Using the deal.II-9.5.1 installation found at /opt/dealii -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_shell_escape_option_groups.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_target_compile_flags.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_target_link_flags.cmake -- The CXX compiler identification is GNU 11.4.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found Boost: /opt/boost/lib/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework -- Found Adiak: /opt/adiak -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Caliper: /opt/caliper -- Build type: Debug -- Configuring done (1.8s) -- Generating done (1.1s) -- Build files have been written to: /var/jenkins/workspace/adamantine_master/build [Pipeline] sh + make -j8 [ 1%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o [ 1%] Copying amr_test.info [ 2%] Copying demo_316_short.info [ 3%] Copying demo_316_short_anisotropic.info [ 5%] Copying demo_316_short_scan_path_amr.txt [ 5%] Copying demo_316_short_amr.info [ 5%] Copying demo_316_short_scan_path.txt [ 5%] Copying experimental_data_0_0.csv [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_amr_test.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_anisotropic.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_amr.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experimental_data_0_0.csv [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_scan_path_amr.txt [ 6%] Copying extruded_cube.msh [ 6%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_scan_path.txt [ 7%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o [ 7%] Building CXX object source/CMakeFiles/Adamantine.dir/ElectronBeamHeatSource.cc.o [ 8%] Building CXX object source/CMakeFiles/Adamantine.dir/DataAssimilator.cc.o [ 9%] Copying integration_2d_gold.txt [ 9%] Copying integration_2d_ensemble.info [ 10%] Copying integration_2d.info [ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_extruded_cube.msh [ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_gold.txt [ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_ensemble.info [ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d.info [ 11%] Copying integration_3d_gold.txt [ 12%] Building CXX object source/CMakeFiles/Adamantine.dir/Geometry.cc.o [ 12%] Copying integration_3d_gold_0.txt [ 13%] Copying integration_3d_gold_1.txt [ 13%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_0.txt [ 13%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold.txt [ 13%] Copying material_deposition_2d.txt [ 13%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_1.txt [ 14%] Copying material_deposition_3d.txt [ 15%] Copying material_path_test_material_deposition.txt [ 15%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_2d.txt [ 15%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_3d.txt [ 16%] Building CXX object source/CMakeFiles/Adamantine.dir/GoldakHeatSource.cc.o [ 17%] Copying raytracing_experimental_data_0_0.csv [ 17%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_path_test_material_deposition.txt [ 18%] Copying scan_path.txt [ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_raytracing_experimental_data_0_0.csv [ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path.txt [ 18%] Copying scan_path_diagonal.txt [ 19%] Copying scan_path_event_series.inp [ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_diagonal.txt [ 19%] Copying scan_path_test_thermal_physics.txt [ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_event_series.inp [ 19%] Building CXX object source/CMakeFiles/Adamantine.dir/ImplicitOperator.cc.o [ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_test_thermal_physics.txt [ 20%] Copying scan_path_L.txt [ 20%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_L.txt [ 21%] Copying scan_path_layers.txt [ 21%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_layers.txt [ 22%] Copying bare_plate_L_ensemble.info [ 22%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_ensemble.info [ 23%] Copying bare_plate_L_da.info [ 23%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da.info [ 23%] Copying bare_plate_L_scan_path.txt [ 23%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path.txt [ 24%] Copying bare_plate_L_scan_path_fast.txt [ 24%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path_fast.txt [ 25%] Copying bare_plate_L_expt_log.txt [ 25%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_log.txt [ 25%] Copying bare_plate_L_expt_data_0_0.csv [ 25%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_0.csv [ 26%] Copying bare_plate_L_expt_data_0_1.csv [ 26%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_1.csv [ 27%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialPropertyInstDev.cc.o [ 28%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialPropertyInstHost.cc.o [ 29%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalPhysics.cc.o [ 29%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalOperator.cc.o [ 29%] Copying experiment_log_test.txt [ 29%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experiment_log_test.txt [ 30%] Copying bare_plate_L_da_aug_ref_log.txt [ 30%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_log.txt [ 31%] Copying bare_plate_L_da_aug_ref_data_0_0.csv [ 31%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv [ 31%] Copying bare_plate_L_da_aug_ref_data_0_1.csv [ 31%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv [ 32%] Copying bare_plate_L_da_augmented.info [ 32%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_augmented.info [ 33%] Copying thermoelastic_bare_plate.info [ 33%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate.info [ 34%] Copying thermoelastic_bare_plate_scan_path.txt [ 34%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_scan_path.txt [ 34%] Copying rays_cam-0-0_test_full.csv [ 34%] Built target _var_jenkins_workspace_adamantine_master_build_bin_rays_cam-0-0_test_full.csv [ 35%] Copying thermoelastic_bare_plate_add_material_scan_path.txt [ 35%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_add_material_scan_path.txt [ 36%] Building CXX object source/CMakeFiles/Adamantine.dir/NewtonSolver.cc.o [ 37%] Building CXX object source/CMakeFiles/Adamantine.dir/PointCloud.cc.o [ 37%] Building CXX object source/CMakeFiles/Adamantine.dir/PostProcessor.cc.o [ 38%] Building CXX object source/CMakeFiles/Adamantine.dir/RayTracing.cc.o [ 39%] Building CXX object source/CMakeFiles/Adamantine.dir/ScanPath.cc.o [ 40%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorInstSHost.cc.o [ 40%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorInstSLHost.cc.o [ 41%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorInstSLPHost.cc.o [ 42%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorDeviceInstSDev.cc.o [ 42%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorDeviceInstSLDev.cc.o [ 43%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorDeviceInstSLPDev.cc.o [ 44%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSDev.cc.o [ 45%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLDev.cc.o [ 45%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLPDev.cc.o [ 46%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSHost.cc.o [ 47%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLHost.cc.o [ 47%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLPHost.cc.o [ 48%] Building CXX object source/CMakeFiles/Adamantine.dir/Timer.cc.o [ 49%] Building CXX object source/CMakeFiles/Adamantine.dir/ensemble_management.cc.o [ 49%] Building CXX object source/CMakeFiles/Adamantine.dir/experimental_data_utils.cc.o [ 50%] Building CXX object source/CMakeFiles/Adamantine.dir/material_deposition.cc.o [ 51%] Building CXX object source/CMakeFiles/Adamantine.dir/validate_input_database.cc.o [ 52%] Copying integration_da_add_material.info [ 52%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material.info [ 52%] Copying integration_da_add_material_expt_log.txt [ 52%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_log.txt [ 53%] Copying integration_da_add_material_expt_pc_0_0.csv [ 53%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_pc_0_0.csv [ 54%] Copying integration_da_add_material_sp.txt [ 54%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_sp.txt [ 55%] Copying integration_da_add_material_expt_ray_0_0.csv [ 55%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_ray_0_0.csv [ 56%] Linking CXX static library libAdamantine.a [ 56%] Built target Adamantine [ 57%] Building CXX object tests/CMakeFiles/test_data_assimilator.dir/test_data_assimilator.cc.o [ 57%] Building CXX object application/CMakeFiles/adamantine.dir/adamantine.cc.o [ 58%] Building CXX object tests/CMakeFiles/test_heat_source.dir/test_heat_source.cc.o [ 59%] Building CXX object tests/CMakeFiles/test_integration_3d_device.dir/test_integration_3d_device.cc.o [ 59%] Building CXX object tests/CMakeFiles/test_geometry.dir/test_geometry.cc.o [ 60%] Building CXX object tests/CMakeFiles/test_implicit_operator.dir/test_implicit_operator.cc.o [ 61%] Building CXX object tests/CMakeFiles/test_integration_da.dir/test_integration_da.cc.o [ 61%] Building CXX object tests/CMakeFiles/test_integration_thermoelastic.dir/test_integration_thermoelastic.cc.o [ 62%] Linking CXX executable ../bin/test_heat_source [ 62%] Linking CXX executable ../bin/test_data_assimilator [ 62%] Built target test_heat_source [ 62%] Building CXX object tests/CMakeFiles/test_material_property.dir/test_material_property.cc.o [ 62%] Linking CXX executable ../bin/test_implicit_operator [ 63%] Linking CXX executable ../bin/test_geometry [ 63%] Built target test_data_assimilator [ 64%] Building CXX object tests/CMakeFiles/test_material_property_device.dir/test_material_property_device.cc.o [ 64%] Built target test_implicit_operator [ 65%] Building CXX object tests/CMakeFiles/test_mechanical_operator.dir/test_mechanical_operator.cc.o [ 65%] Built target test_geometry [ 66%] Building CXX object tests/CMakeFiles/test_mechanical_physics.dir/test_mechanical_physics.cc.o [ 67%] Linking CXX executable ../bin/test_integration_3d_device [ 67%] Linking CXX executable ../bin/test_integration_da [ 67%] Linking CXX executable ../bin/test_integration_thermoelastic [ 67%] Built target test_integration_da [ 68%] Building CXX object tests/CMakeFiles/test_newton_solver.dir/test_newton_solver.cc.o [ 68%] Built target test_integration_thermoelastic [ 68%] Built target test_integration_3d_device [ 68%] Building CXX object tests/CMakeFiles/test_post_processor.dir/test_post_processor.cc.o [ 69%] Building CXX object tests/CMakeFiles/test_scan_path.dir/test_scan_path.cc.o [ 70%] Linking CXX executable ../bin/test_material_property [ 70%] Linking CXX executable ../bin/test_material_property_device [ 70%] Built target test_material_property [ 70%] Building CXX object tests/CMakeFiles/test_thermal_operator.dir/test_thermal_operator.cc.o [ 71%] Linking CXX executable ../bin/test_mechanical_operator [ 72%] Linking CXX executable ../bin/test_newton_solver [ 72%] Built target test_material_property_device [ 73%] Building CXX object tests/CMakeFiles/test_thermal_operator_device.dir/test_thermal_operator_device.cc.o [ 74%] Linking CXX executable ../bin/test_scan_path [ 74%] Built target test_newton_solver [ 75%] Building CXX object tests/CMakeFiles/test_thermal_physics_device.dir/test_thermal_physics_device.cc.o [ 75%] Built target test_mechanical_operator [ 76%] Building CXX object tests/CMakeFiles/test_timer.dir/test_timer.cc.o [ 76%] Linking CXX executable ../bin/test_mechanical_physics [ 76%] Built target test_scan_path [ 76%] Building CXX object tests/CMakeFiles/test_utils.dir/test_utils.cc.o [ 76%] Built target test_mechanical_physics [ 77%] Building CXX object tests/CMakeFiles/test_validate_input_database.dir/test_validate_input_database.cc.o [ 78%] Linking CXX executable ../bin/test_timer [ 79%] Linking CXX executable ../bin/test_utils [ 79%] Built target test_timer [ 80%] Linking CXX executable ../bin/test_post_processor [ 80%] Building CXX object tests/CMakeFiles/test_experimental_data.dir/test_experimental_data.cc.o [ 80%] Built target test_utils [ 81%] Building CXX object tests/CMakeFiles/test_integration_2d.dir/test_integration_2d.cc.o [ 81%] Linking CXX executable ../bin/test_thermal_operator_device [ 82%] Linking CXX executable ../bin/test_validate_input_database [ 82%] Built target test_post_processor [ 82%] Linking CXX executable ../bin/test_thermal_physics_device [ 83%] Building CXX object tests/CMakeFiles/test_integration_2d_device.dir/test_integration_2d_device.cc.o [ 83%] Built target test_validate_input_database [ 84%] Building CXX object tests/CMakeFiles/test_integration_3d.dir/test_integration_3d.cc.o [ 85%] Linking CXX executable ../bin/test_thermal_operator [ 85%] Built target test_thermal_operator_device [ 85%] Building CXX object tests/CMakeFiles/test_integration_3d_amr.dir/test_integration_3d_amr.cc.o [ 85%] Built target test_thermal_physics_device [ 86%] Building CXX object tests/CMakeFiles/test_integration_3d_amr_device.dir/test_integration_3d_amr_device.cc.o [ 86%] Built target test_thermal_operator [ 87%] Building CXX object tests/CMakeFiles/test_integration_da_augmented.dir/test_integration_da_augmented.cc.o [ 88%] Linking CXX executable ../bin/test_experimental_data [ 88%] Built target test_experimental_data [ 89%] Building CXX object tests/CMakeFiles/test_material_deposition.dir/test_material_deposition.cc.o [ 89%] Linking CXX executable ../bin/test_integration_2d_device [ 90%] Linking CXX executable ../bin/test_integration_2d [ 91%] Linking CXX executable ../bin/test_integration_3d_amr_device [ 92%] Linking CXX executable ../bin/test_integration_3d_amr [ 92%] Built target test_integration_2d_device [ 93%] Building CXX object tests/CMakeFiles/test_thermal_physics.dir/test_thermal_physics.cc.o [ 94%] Linking CXX executable ../bin/test_integration_3d [ 94%] Built target test_integration_2d [ 95%] Building CXX object tests/CMakeFiles/test_ensemble_management.dir/test_ensemble_management.cc.o [ 95%] Built target test_integration_3d_amr_device [ 96%] Linking CXX executable ../bin/test_integration_da_augmented [ 97%] Linking CXX executable ../bin/test_material_deposition [ 97%] Built target test_integration_3d_amr [ 97%] Built target test_material_deposition [ 97%] Built target test_integration_da_augmented [ 97%] Built target test_integration_3d [ 98%] Linking CXX executable ../bin/test_ensemble_management [ 99%] Linking CXX executable ../bin/test_thermal_physics [ 99%] Built target test_ensemble_management [100%] Linking CXX executable ../bin/adamantine [100%] Built target test_thermal_physics [100%] Built target adamantine [Pipeline] sh + ctest --no-compress-output -R test_ -T Test Site: 163ea70a8245 Build name: Linux-c++ Create new tag: 20240530-1811 - Experimental Test project /var/jenkins/workspace/adamantine_master/build Start 2: test_integration_da_1 1/43 Test #2: test_integration_da_1 .............. Passed 129.81 sec Start 3: test_integration_da_2 2/43 Test #3: test_integration_da_2 .............. Passed 115.68 sec Start 4: test_integration_da_3 3/43 Test #4: test_integration_da_3 .............. Passed 98.23 sec Start 5: test_integration_da_6 4/43 Test #5: test_integration_da_6 .............. Passed 93.66 sec Start 6: test_data_assimilator_1 5/43 Test #6: test_data_assimilator_1 ............ Passed 0.70 sec Start 7: test_geometry_1 6/43 Test #7: test_geometry_1 .................... Passed 0.64 sec Start 8: test_heat_source_1 7/43 Test #8: test_heat_source_1 ................. Passed 0.46 sec Start 9: test_implicit_operator_1 8/43 Test #9: test_implicit_operator_1 ........... Passed 0.43 sec Start 10: test_integration_3d_device_1 9/43 Test #10: test_integration_3d_device_1 ....... Passed 453.75 sec Start 11: test_integration_thermoelastic_1 10/43 Test #11: test_integration_thermoelastic_1 ... Passed 234.95 sec Start 12: test_material_property_1 11/43 Test #12: test_material_property_1 ........... Passed 0.37 sec Start 13: test_material_property_device_1 12/43 Test #13: test_material_property_device_1 .... Passed 0.37 sec Start 14: test_mechanical_operator_1 13/43 Test #14: test_mechanical_operator_1 ......... Passed 14.21 sec Start 15: test_mechanical_physics_1 14/43 Test #15: test_mechanical_physics_1 .......... Passed 49.30 sec Start 16: test_newton_solver_1 15/43 Test #16: test_newton_solver_1 ............... Passed 0.32 sec Start 17: test_post_processor_1 16/43 Test #17: test_post_processor_1 .............. Passed 3.23 sec Start 18: test_scan_path_1 17/43 Test #18: test_scan_path_1 ................... Passed 0.31 sec Start 19: test_thermal_operator_1 18/43 Test #19: test_thermal_operator_1 ............ Passed 2.72 sec Start 20: test_thermal_operator_device_1 19/43 Test #20: test_thermal_operator_device_1 ..... Passed 2.00 sec Start 21: test_thermal_physics_device_1 20/43 Test #21: test_thermal_physics_device_1 ...... Passed 25.42 sec Start 22: test_timer_1 21/43 Test #22: test_timer_1 ....................... Passed 0.89 sec Start 23: test_utils_1 22/43 Test #23: test_utils_1 ....................... Passed 0.30 sec Start 24: test_validate_input_database_1 23/43 Test #24: test_validate_input_database_1 ..... Passed 0.33 sec Start 25: test_experimental_data_1 24/43 Test #25: test_experimental_data_1 ........... Passed 11.58 sec Start 26: test_experimental_data_2 25/43 Test #26: test_experimental_data_2 ........... Passed 0.31 sec Start 27: test_integration_2d_1 26/43 Test #27: test_integration_2d_1 .............. Passed 8.50 sec Start 28: test_integration_2d_2 27/43 Test #28: test_integration_2d_2 .............. Passed 5.74 sec Start 29: test_integration_2d_device_1 28/43 Test #29: test_integration_2d_device_1 ....... Passed 4.17 sec Start 30: test_integration_2d_device_2 29/43 Test #30: test_integration_2d_device_2 ....... Passed 2.58 sec Start 31: test_integration_3d_1 30/43 Test #31: test_integration_3d_1 .............. Passed 237.74 sec Start 32: test_integration_3d_2 31/43 Test #32: test_integration_3d_2 .............. Passed 138.33 sec Start 33: test_integration_3d_amr_1 32/43 Test #33: test_integration_3d_amr_1 .......... Passed 139.24 sec Start 34: test_integration_3d_amr_2 33/43 Test #34: test_integration_3d_amr_2 .......... Passed 78.62 sec Start 35: test_integration_3d_amr_device_1 34/43 Test #35: test_integration_3d_amr_device_1 ... Passed 111.58 sec Start 36: test_integration_3d_amr_device_2 35/43 Test #36: test_integration_3d_amr_device_2 ... Passed 57.09 sec Start 37: test_integration_da_augmented_1 36/43 Test #37: test_integration_da_augmented_1 .... Passed 45.61 sec Start 38: test_integration_da_augmented_2 37/43 Test #38: test_integration_da_augmented_2 .... Passed 32.50 sec Start 39: test_material_deposition_1 38/43 Test #39: test_material_deposition_1 ......... Passed 11.42 sec Start 40: test_material_deposition_2 39/43 Test #40: test_material_deposition_2 ......... Passed 7.64 sec Start 41: test_thermal_physics_1 40/43 Test #41: test_thermal_physics_1 ............. Passed 19.47 sec Start 42: test_thermal_physics_2 41/43 Test #42: test_thermal_physics_2 ............. Passed 12.49 sec Start 43: test_ensemble_management_1 42/43 Test #43: test_ensemble_management_1 ......... Passed 0.29 sec Start 44: test_ensemble_management_2 43/43 Test #44: test_ensemble_management_2 ......... Passed 0.28 sec 100% tests passed, 0 tests failed out of 43 Total Test time (real) = 2153.44 sec [Pipeline] } [Pipeline] // dir Post stage [Pipeline] xunit INFO: Processing CTest-Version 3.x (default) [Pipeline] } $ docker stop --time=1 163ea70a8245f66c44e51dcefa3b794acdd0528a86f33186a0de27f3f638b22a INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_master' for the testing framework 'CTest-Version 3.x (default)'. $ docker rm -f --volumes 163ea70a8245f66c44e51dcefa3b794acdd0528a86f33186a0de27f3f638b22a [Pipeline] // withDockerContainer [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] } [Pipeline] // stage [Pipeline] } Running on waffle03 in /var/jenkins/workspace/adamantine_master [Pipeline] { [Pipeline] checkout Selected Git installation does not exist. Using Default The recommended git tool is: NONE using credential Jenkins ORNL Fetching changes from the remote Git repository Fetching without tags > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine_master/.git # timeout=10 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10 Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git > git --version # timeout=10 > git --version # 'git version 2.17.1' using GIT_ASKPASS to set credentials > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/heads/master:refs/remotes/origin/master # timeout=10 Checking out Revision 2c27da471c322e051cbf92ce8ad7977650ec139e (master) Commit message: "Merge pull request #290 from Rombur/missing_doc" > git config core.sparsecheckout # timeout=10 > git checkout -f 2c27da471c322e051cbf92ce8ad7977650ec139e # timeout=10 [Pipeline] withEnv [Pipeline] { [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker pull rombur/adamantine-stack:latest latest: Pulling from rombur/adamantine-stack Digest: sha256:2493cd483747f260525142263bb1c5ced0cd4b207c7d8378ed4d942d3ee9f9b2 Status: Image is up to date for rombur/adamantine-stack:latest docker.io/rombur/adamantine-stack:latest [Pipeline] } [Pipeline] // withEnv [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker inspect -f . rombur/adamantine-stack:latest . [Pipeline] } [Pipeline] // withEnv [Pipeline] withDockerContainer waffle03 seems to be running inside container 8a38ebaf1bf122c9b57e08bd33d10527f63e1946e482acb7a2e16747d8ba7106 $ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_master --volumes-from 8a38ebaf1bf122c9b57e08bd33d10527f63e1946e482acb7a2e16747d8ba7106 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:latest cat $ docker top 0c6a2241c3a4b2a9cf370a7b7816448964e7e909bd4b52428b7a24c78764a30a -eo pid,comm ERROR: The container started but didn't run the expected command. Please double check your ENTRYPOINT does execute the command passed as docker run argument, as required by official docker images (see https://github.com/docker-library/official-images#consistency for entrypoint consistency requirements). Alternatively you can force image entrypoint to be disabled by adding option `--entrypoint=''`. [Pipeline] { [Pipeline] sh + rm -rf build + mkdir -p build [Pipeline] dir Running in /var/jenkins/workspace/adamantine_master/build [Pipeline] { [Pipeline] sh -- Using the deal.II-9.5.1 installation found at /opt/dealii -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_shell_escape_option_groups.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_target_compile_flags.cmake -- Include macro /opt/dealii/share/deal.II/macros/macro_target_link_flags.cmake -- The CXX compiler identification is GNU 11.4.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /opt/trilinos/bin/nvcc_wrapper - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found Boost: /opt/boost/lib/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework -- Build type: Debug -- Configuring done (8.8s) -- Generating done (1.7s) -- Build files have been written to: /var/jenkins/workspace/adamantine_master/build [Pipeline] sh + make -j8 [ 0%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o [ 1%] Copying demo_316_short_amr.info [ 3%] Copying amr_test.info [ 3%] Copying demo_316_short_anisotropic.info [ 3%] Copying demo_316_short.info [ 3%] Copying experimental_data_0_0.csv [ 5%] Copying demo_316_short_scan_path_amr.txt [ 5%] Copying demo_316_short_scan_path.txt [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_amr.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_amr_test.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_anisotropic.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short.info [ 5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experimental_data_0_0.csv [ 6%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_scan_path.txt [ 6%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o [ 6%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_scan_path_amr.txt [ 7%] Building CXX object source/CMakeFiles/Adamantine.dir/DataAssimilator.cc.o [ 8%] Copying extruded_cube.msh [ 9%] Copying integration_2d.info [ 9%] Copying integration_2d_ensemble.info [ 10%] Copying integration_2d_gold.txt [ 11%] Copying integration_3d_gold.txt [ 11%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_ensemble.info [ 11%] Built target _var_jenkins_workspace_adamantine_master_build_bin_extruded_cube.msh [ 11%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d.info [ 11%] Building CXX object source/CMakeFiles/Adamantine.dir/ElectronBeamHeatSource.cc.o [ 11%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_gold.txt [ 12%] Building CXX object source/CMakeFiles/Adamantine.dir/Geometry.cc.o [ 12%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold.txt [ 13%] Building CXX object source/CMakeFiles/Adamantine.dir/GoldakHeatSource.cc.o [ 13%] Copying integration_3d_gold_0.txt [ 14%] Copying integration_3d_gold_1.txt [ 14%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_0.txt [ 14%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_1.txt [ 14%] Copying material_deposition_2d.txt [ 15%] Copying material_deposition_3d.txt [ 15%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_2d.txt [ 16%] Copying material_path_test_material_deposition.txt [ 16%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_3d.txt [ 17%] Copying raytracing_experimental_data_0_0.csv [ 17%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_path_test_material_deposition.txt [ 18%] Copying scan_path.txt [ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_raytracing_experimental_data_0_0.csv [ 18%] Copying scan_path_diagonal.txt [ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path.txt [ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_diagonal.txt [ 19%] Copying scan_path_event_series.inp [ 19%] Copying scan_path_test_thermal_physics.txt [ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_event_series.inp [ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_test_thermal_physics.txt [ 19%] Building CXX object source/CMakeFiles/Adamantine.dir/ImplicitOperator.cc.o [ 20%] Copying scan_path_L.txt [ 20%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_L.txt [ 21%] Copying scan_path_layers.txt [ 21%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_layers.txt [ 22%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialPropertyInstDev.cc.o [ 23%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialPropertyInstHost.cc.o [ 24%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalOperator.cc.o [ 24%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalPhysics.cc.o [ 25%] Building CXX object source/CMakeFiles/Adamantine.dir/NewtonSolver.cc.o /var/jenkins/workspace/adamantine_master/source/MaterialProperty.templates.hh(241): warning #20013-D: calling a constexpr __host__ function("signaling_NaN") from a __host__ __device__ function("operator()") is not allowed. The experimental flag '--expt-relaxed-constexpr' can be used to allow this. state(i, j) = std::numeric_limits<double>::signaling_NaN(); ^ Remark: The warnings can be suppressed with "-diag-suppress <warning-number>" [ 26%] Building CXX object source/CMakeFiles/Adamantine.dir/PointCloud.cc.o [ 26%] Building CXX object source/CMakeFiles/Adamantine.dir/PostProcessor.cc.o /var/jenkins/workspace/adamantine_master/source/MaterialProperty.templates.hh(241): warning #20013-D: calling a constexpr __host__ function("signaling_NaN") from a __host__ __device__ function("operator()") is not allowed. The experimental flag '--expt-relaxed-constexpr' can be used to allow this. state(i, j) = std::numeric_limits<double>::signaling_NaN(); ^ Remark: The warnings can be suppressed with "-diag-suppress <warning-number>" [ 27%] Building CXX object source/CMakeFiles/Adamantine.dir/RayTracing.cc.o [ 28%] Building CXX object source/CMakeFiles/Adamantine.dir/ScanPath.cc.o [ 29%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorInstSHost.cc.o [ 29%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorInstSLHost.cc.o [ 30%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorInstSLPHost.cc.o [ 31%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorDeviceInstSDev.cc.o [ 31%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorDeviceInstSLDev.cc.o [ 32%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperatorDeviceInstSLPDev.cc.o [ 33%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSDev.cc.o [ 34%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLDev.cc.o [ 34%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLPDev.cc.o [ 35%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSHost.cc.o [ 36%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLHost.cc.o [ 36%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysicsInstSLPHost.cc.o [ 37%] Building CXX object source/CMakeFiles/Adamantine.dir/Timer.cc.o [ 38%] Copying bare_plate_L_ensemble.info [ 38%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_ensemble.info [ 39%] Building CXX object source/CMakeFiles/Adamantine.dir/ensemble_management.cc.o [ 39%] Building CXX object source/CMakeFiles/Adamantine.dir/experimental_data_utils.cc.o /var/jenkins/workspace/adamantine_master/source/experimental_data_utils.cc(100): warning #68-D: integer conversion resulted in a change of sign : -1; ^ detected during instantiation of "std::pair<std::vector<signed int, std::allocator<signed int>>, std::vector<signed int, std::allocator<signed int>>> adamantine::get_expt_to_dof_mapping(const adamantine::PointsValues<dim> &, const dealii::DoFHandler<dim, dim> &) [with dim=2]" at line 226 Remark: The warnings can be suppressed with "-diag-suppress <warning-number>" /var/jenkins/workspace/adamantine_master/source/experimental_data_utils.cc(100): warning #68-D: integer conversion resulted in a change of sign : -1; ^ detected during instantiation of "std::pair<std::vector<signed int, std::allocator<signed int>>, std::vector<signed int, std::allocator<signed int>>> adamantine::get_expt_to_dof_mapping(const adamantine::PointsValues<dim> &, const dealii::DoFHandler<dim, dim> &) [with dim=3]" at line 229 [ 40%] Building CXX object source/CMakeFiles/Adamantine.dir/material_deposition.cc.o [ 41%] Building CXX object source/CMakeFiles/Adamantine.dir/validate_input_database.cc.o [ 42%] Copying bare_plate_L_da.info [ 42%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da.info [ 42%] Copying bare_plate_L_scan_path.txt [ 42%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path.txt [ 43%] Copying bare_plate_L_scan_path_fast.txt [ 43%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path_fast.txt [ 44%] Copying bare_plate_L_expt_log.txt [ 44%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_log.txt [ 44%] Copying bare_plate_L_expt_data_0_0.csv [ 44%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_0.csv [ 45%] Copying bare_plate_L_expt_data_0_1.csv [ 45%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_1.csv [ 45%] Copying experiment_log_test.txt [ 45%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experiment_log_test.txt [ 46%] Copying bare_plate_L_da_aug_ref_log.txt [ 46%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_log.txt [ 47%] Copying bare_plate_L_da_aug_ref_data_0_0.csv [ 47%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv [ 47%] Copying bare_plate_L_da_aug_ref_data_0_1.csv [ 47%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv [ 48%] Copying bare_plate_L_da_augmented.info [ 48%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_augmented.info [ 49%] Copying thermoelastic_bare_plate.info [ 49%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate.info [ 50%] Copying thermoelastic_bare_plate_scan_path.txt [ 50%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_scan_path.txt [ 50%] Copying rays_cam-0-0_test_full.csv [ 50%] Built target _var_jenkins_workspace_adamantine_master_build_bin_rays_cam-0-0_test_full.csv [ 51%] Copying thermoelastic_bare_plate_add_material_scan_path.txt [ 51%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_add_material_scan_path.txt [ 52%] Copying integration_da_add_material.info [ 52%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material.info [ 52%] Copying integration_da_add_material_expt_log.txt [ 52%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_log.txt [ 53%] Copying integration_da_add_material_expt_pc_0_0.csv [ 53%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_pc_0_0.csv [ 54%] Copying integration_da_add_material_sp.txt [ 54%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_sp.txt [ 55%] Copying integration_da_add_material_expt_ray_0_0.csv [ 55%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_ray_0_0.csv /var/jenkins/workspace/adamantine_master/source/experimental_data_utils.cc(100): warning #68-D: integer conversion resulted in a change of sign : -1; ^ detected during instantiation of "std::pair<std::vector<signed int, std::allocator<signed int>>, std::vector<signed int, std::allocator<signed int>>> adamantine::get_expt_to_dof_mapping(const adamantine::PointsValues<dim> &, const dealii::DoFHandler<dim, dim> &) [with dim=2]" at line 226 Remark: The warnings can be suppressed with "-diag-suppress <warning-number>" /var/jenkins/workspace/adamantine_master/source/experimental_data_utils.cc(100): warning #68-D: integer conversion resulted in a change of sign : -1; ^ detected during instantiation of "std::pair<std::vector<signed int, std::allocator<signed int>>, std::vector<signed int, std::allocator<signed int>>> adamantine::get_expt_to_dof_mapping(const adamantine::PointsValues<dim> &, const dealii::DoFHandler<dim, dim> &) [with dim=3]" at line 229 [ 56%] Linking CXX static library libAdamantine.a [ 56%] Built target Adamantine [ 56%] Building CXX object tests/CMakeFiles/test_heat_source.dir/test_heat_source.cc.o [ 58%] Building CXX object application/CMakeFiles/adamantine.dir/adamantine.cc.o [ 59%] Building CXX object tests/CMakeFiles/test_integration_da.dir/test_integration_da.cc.o [ 59%] Building CXX object tests/CMakeFiles/test_geometry.dir/test_geometry.cc.o [ 59%] Building CXX object tests/CMakeFiles/test_integration_3d_device.dir/test_integration_3d_device.cc.o [ 59%] Building CXX object tests/CMakeFiles/test_implicit_operator.dir/test_implicit_operator.cc.o [ 60%] Building CXX object tests/CMakeFiles/test_data_assimilator.dir/test_data_assimilator.cc.o [ 61%] Building CXX object tests/CMakeFiles/test_integration_thermoelastic.dir/test_integration_thermoelastic.cc.o [ 62%] Linking CXX executable ../bin/test_heat_source [ 62%] Built target test_heat_source [ 62%] Building CXX object tests/CMakeFiles/test_material_property.dir/test_material_property.cc.o [ 62%] Linking CXX executable ../bin/test_data_assimilator [ 62%] Linking CXX executable ../bin/test_implicit_operator [ 62%] Built target test_data_assimilator [ 63%] Building CXX object tests/CMakeFiles/test_material_property_device.dir/test_material_property_device.cc.o [ 63%] Built target test_implicit_operator [ 64%] Building CXX object tests/CMakeFiles/test_mechanical_operator.dir/test_mechanical_operator.cc.o [ 65%] Linking CXX executable ../bin/test_geometry [ 65%] Linking CXX executable ../bin/test_integration_da [ 65%] Linking CXX executable ../bin/test_integration_thermoelastic [ 66%] Linking CXX executable ../bin/test_integration_3d_device [ 66%] Built target test_geometry [ 67%] Building CXX object tests/CMakeFiles/test_mechanical_physics.dir/test_mechanical_physics.cc.o [ 67%] Built target test_integration_da [ 68%] Building CXX object tests/CMakeFiles/test_newton_solver.dir/test_newton_solver.cc.o [ 69%] Linking CXX executable ../bin/test_material_property [ 69%] Built target test_integration_thermoelastic [ 69%] Building CXX object tests/CMakeFiles/test_post_processor.dir/test_post_processor.cc.o [ 69%] Built target test_integration_3d_device [ 70%] Building CXX object tests/CMakeFiles/test_scan_path.dir/test_scan_path.cc.o [ 70%] Built target test_material_property [ 70%] Building CXX object tests/CMakeFiles/test_thermal_operator.dir/test_thermal_operator.cc.o [ 71%] Linking CXX executable ../bin/test_newton_solver [ 71%] Linking CXX executable ../bin/test_material_property_device [ 71%] Built target test_newton_solver [ 72%] Building CXX object tests/CMakeFiles/test_thermal_operator_device.dir/test_thermal_operator_device.cc.o [ 73%] Linking CXX executable ../bin/test_scan_path [ 73%] Built target test_material_property_device [ 74%] Building CXX object tests/CMakeFiles/test_thermal_physics_device.dir/test_thermal_physics_device.cc.o [ 75%] Linking CXX executable ../bin/test_mechanical_operator [ 75%] Built target test_scan_path [ 76%] Building CXX object tests/CMakeFiles/test_timer.dir/test_timer.cc.o [ 76%] Built target test_mechanical_operator [ 76%] Building CXX object tests/CMakeFiles/test_utils.dir/test_utils.cc.o [ 77%] Linking CXX executable ../bin/test_timer [ 77%] Linking CXX executable ../bin/test_mechanical_physics [ 78%] Linking CXX executable ../bin/test_post_processor [ 78%] Built target test_timer [ 79%] Building CXX object tests/CMakeFiles/test_validate_input_database.dir/test_validate_input_database.cc.o [ 80%] Linking CXX executable ../bin/test_utils [ 80%] Built target test_mechanical_physics [ 80%] Building CXX object tests/CMakeFiles/test_experimental_data.dir/test_experimental_data.cc.o [ 80%] Built target test_utils [ 81%] Building CXX object tests/CMakeFiles/test_integration_2d.dir/test_integration_2d.cc.o [ 81%] Built target test_post_processor [ 82%] Building CXX object tests/CMakeFiles/test_integration_2d_device.dir/test_integration_2d_device.cc.o [ 83%] Linking CXX executable ../bin/test_thermal_operator [ 83%] Built target test_thermal_operator [ 84%] Building CXX object tests/CMakeFiles/test_integration_3d.dir/test_integration_3d.cc.o [ 84%] Linking CXX executable ../bin/test_thermal_physics_device [ 84%] Built target test_thermal_physics_device [ 84%] Building CXX object tests/CMakeFiles/test_integration_3d_amr.dir/test_integration_3d_amr.cc.o [ 84%] Linking CXX executable ../bin/test_thermal_operator_device [ 85%] Linking CXX executable ../bin/test_validate_input_database [ 85%] Built target test_validate_input_database [ 86%] Building CXX object tests/CMakeFiles/test_integration_3d_amr_device.dir/test_integration_3d_amr_device.cc.o [ 86%] Built target test_thermal_operator_device [ 87%] Building CXX object tests/CMakeFiles/test_integration_da_augmented.dir/test_integration_da_augmented.cc.o [ 88%] Linking CXX executable ../bin/test_experimental_data [ 89%] Linking CXX executable ../bin/adamantine [ 89%] Built target test_experimental_data [ 90%] Building CXX object tests/CMakeFiles/test_material_deposition.dir/test_material_deposition.cc.o [ 90%] Built target adamantine [ 91%] Building CXX object tests/CMakeFiles/test_thermal_physics.dir/test_thermal_physics.cc.o [ 91%] Linking CXX executable ../bin/test_integration_2d_device [ 92%] Linking CXX executable ../bin/test_integration_2d [ 93%] Linking CXX executable ../bin/test_integration_3d [ 93%] Built target test_integration_2d_device [ 94%] Building CXX object tests/CMakeFiles/test_ensemble_management.dir/test_ensemble_management.cc.o [ 94%] Built target test_integration_2d [ 94%] Built target test_integration_3d [ 95%] Linking CXX executable ../bin/test_integration_3d_amr [ 96%] Linking CXX executable ../bin/test_integration_3d_amr_device [ 97%] Linking CXX executable ../bin/test_integration_da_augmented [ 97%] Built target test_integration_3d_amr [ 98%] Linking CXX executable ../bin/test_material_deposition [ 98%] Built target test_integration_3d_amr_device [ 98%] Built target test_integration_da_augmented [ 98%] Built target test_material_deposition [ 99%] Linking CXX executable ../bin/test_thermal_physics [100%] Linking CXX executable ../bin/test_ensemble_management [100%] Built target test_thermal_physics [100%] Built target test_ensemble_management [Pipeline] sh + ctest --no-compress-output -R test_ -T Test Site: 0c6a2241c3a4 Build name: Linux-nvcc_wrapper Create new tag: 20240530-1901 - Experimental Test project /var/jenkins/workspace/adamantine_master/build Start 2: test_integration_da_1 1/43 Test #2: test_integration_da_1 .............. Passed 146.86 sec Start 3: test_integration_da_2 2/43 Test #3: test_integration_da_2 .............. Passed 127.28 sec Start 4: test_integration_da_3 3/43 Test #4: test_integration_da_3 .............. Passed 113.74 sec Start 5: test_integration_da_6 4/43 Test #5: test_integration_da_6 .............. Passed 103.43 sec Start 6: test_data_assimilator_1 5/43 Test #6: test_data_assimilator_1 ............ Passed 2.69 sec Start 7: test_geometry_1 6/43 Test #7: test_geometry_1 .................... Passed 2.58 sec Start 8: test_heat_source_1 7/43 Test #8: test_heat_source_1 ................. Passed 2.44 sec Start 9: test_implicit_operator_1 8/43 Test #9: test_implicit_operator_1 ........... Passed 2.48 sec Start 10: test_integration_3d_device_1 9/43 Test #10: test_integration_3d_device_1 ....... Passed 498.29 sec Start 11: test_integration_thermoelastic_1 10/43 Test #11: test_integration_thermoelastic_1 ... Passed 310.24 sec Start 12: test_material_property_1 11/43 Test #12: test_material_property_1 ........... Passed 2.65 sec Start 13: test_material_property_device_1 12/43 Test #13: test_material_property_device_1 .... Passed 2.50 sec Start 14: test_mechanical_operator_1 13/43 Test #14: test_mechanical_operator_1 ......... Passed 16.26 sec Start 15: test_mechanical_physics_1 14/43 Test #15: test_mechanical_physics_1 .......... Passed 61.41 sec Start 16: test_newton_solver_1 15/43 Test #16: test_newton_solver_1 ............... Passed 2.40 sec Start 17: test_post_processor_1 16/43 Test #17: test_post_processor_1 .............. Passed 5.67 sec Start 18: test_scan_path_1 17/43 Test #18: test_scan_path_1 ................... Passed 2.43 sec Start 19: test_thermal_operator_1 18/43 Test #19: test_thermal_operator_1 ............ Passed 5.28 sec Start 20: test_thermal_operator_device_1 19/43 Test #20: test_thermal_operator_device_1 ..... Passed 3.63 sec Start 21: test_thermal_physics_device_1 20/43 Test #21: test_thermal_physics_device_1 ...... Passed 31.34 sec Start 22: test_timer_1 21/43 Test #22: test_timer_1 ....................... Passed 3.02 sec Start 23: test_utils_1 22/43 Test #23: test_utils_1 ....................... Passed 2.40 sec Start 24: test_validate_input_database_1 23/43 Test #24: test_validate_input_database_1 ..... Passed 2.41 sec Start 25: test_experimental_data_1 24/43 Test #25: test_experimental_data_1 ........... Passed 14.40 sec Start 26: test_experimental_data_2 25/43 Test #26: test_experimental_data_2 ........... Passed 2.61 sec Start 27: test_integration_2d_1 26/43 Test #27: test_integration_2d_1 .............. Passed 13.23 sec Start 28: test_integration_2d_2 27/43 Test #28: test_integration_2d_2 .............. Passed 9.25 sec Start 29: test_integration_2d_device_1 28/43 Test #29: test_integration_2d_device_1 ....... Passed 6.27 sec Start 30: test_integration_2d_device_2 29/43 Test #30: test_integration_2d_device_2 ....... Passed 5.27 sec Start 31: test_integration_3d_1 30/43 Test #31: test_integration_3d_1 .............. Passed 281.18 sec Start 32: test_integration_3d_2 31/43 Test #32: test_integration_3d_2 .............. Passed 159.35 sec Start 33: test_integration_3d_amr_1 32/43 Test #33: test_integration_3d_amr_1 .......... Passed 164.76 sec Start 34: test_integration_3d_amr_2 33/43 Test #34: test_integration_3d_amr_2 .......... Passed 94.28 sec Start 35: test_integration_3d_amr_device_1 34/43 Test #35: test_integration_3d_amr_device_1 ... Passed 115.55 sec Start 36: test_integration_3d_amr_device_2 35/43 Test #36: test_integration_3d_amr_device_2 ... Passed 62.72 sec Start 37: test_integration_da_augmented_1 36/43 Test #37: test_integration_da_augmented_1 .... Passed 48.08 sec Start 38: test_integration_da_augmented_2 37/43 Test #38: test_integration_da_augmented_2 .... Passed 35.26 sec Start 39: test_material_deposition_1 38/43 Test #39: test_material_deposition_1 ......... Passed 18.75 sec Start 40: test_material_deposition_2 39/43 Test #40: test_material_deposition_2 ......... Passed 13.38 sec Start 41: test_thermal_physics_1 40/43 Test #41: test_thermal_physics_1 ............. Passed 27.89 sec Start 42: test_thermal_physics_2 41/43 Test #42: test_thermal_physics_2 ............. Passed 18.82 sec Start 43: test_ensemble_management_1 42/43 Test #43: test_ensemble_management_1 ......... Passed 2.60 sec Start 44: test_ensemble_management_2 43/43 Test #44: test_ensemble_management_2 ......... Passed 2.59 sec 100% tests passed, 0 tests failed out of 43 Total Test time (real) = 2547.72 sec [Pipeline] } [Pipeline] // dir Post stage [Pipeline] xunit INFO: Processing CTest-Version 3.x (default) [Pipeline] } $ docker stop --time=1 0c6a2241c3a4b2a9cf370a7b7816448964e7e909bd4b52428b7a24c78764a30a INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_master' for the testing framework 'CTest-Version 3.x (default)'. $ docker rm -f --volumes 0c6a2241c3a4b2a9cf370a7b7816448964e7e909bd4b52428b7a24c78764a30a [Pipeline] // withDockerContainer [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // parallel [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // timeout [Pipeline] } [Pipeline] // withEnv [Pipeline] End of Pipeline GitHub has been notified of this commit’s build result Finished: SUCCESS