Console Output

Push event to branch master
15:47:10 Connecting to https://api.github.com using Jenkins ORNL
Obtained ci/jenkins_config from 53a738c40e2bb6cfdf152bb2a09e30362e6db236
[Pipeline] Start of Pipeline
[Pipeline] withEnv
[Pipeline] {
[Pipeline] timeout
Timeout set to expire in 6 hr 0 min
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Test)
[Pipeline] parallel
[Pipeline] { (Branch: CPU-on-device)
[Pipeline] { (Branch: CPU)
[Pipeline] { (Branch: CUDA)
[Pipeline] stage
[Pipeline] { (CPU-on-device)
[Pipeline] stage
[Pipeline] { (CPU)
[Pipeline] stage
[Pipeline] { (CUDA)
[Pipeline] node
Running on CpuNode6 in /var/jenkins/workspace/adamantine_master
[Pipeline] node
[Pipeline] node
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential Jenkins ORNL
Fetching changes from the remote Git repository
Fetching without tags
Checking out Revision 53a738c40e2bb6cfdf152bb2a09e30362e6db236 (master)
Commit message: "Merge pull request #251 from stvdwtt/fix_elastic_limit"
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine_master/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git
 > git --version # timeout=10
 > git --version # 'git version 2.17.1'
using GIT_ASKPASS to set credentials 
 > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 53a738c40e2bb6cfdf152bb2a09e30362e6db236 # timeout=10
 > git rev-list --no-walk edaf832fa0f3c440f567c1aabbe5c38074452adb # timeout=10
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker pull rombur/adamantine-stack:latest
latest: Pulling from rombur/adamantine-stack
Digest: sha256:73d1047f633d1d71caa64b01203f89188b511871872b35af176d0cc2dd4aedc3
Status: Image is up to date for rombur/adamantine-stack:latest
docker.io/rombur/adamantine-stack:latest
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:latest
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
CpuNode6 seems to be running inside container 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_master --volumes-from 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:latest cat
$ docker top f5cdf34958b2e1d67f3bafd12425d6720ed4f13e16b12fd9363d8abb7ec75c68 -eo pid,comm
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
[Pipeline] dir
Running in /var/jenkins/workspace/adamantine_master/build
[Pipeline] {
[Pipeline] sh
-- Using the deal.II-9.5.0-pre installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake
-- The CXX compiler identification is GNU 11.3.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /opt/boost/lib/cmake/Boost-1.80.0/BoostConfig.cmake (found suitable version "1.80.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Build type: Release
-- Configuring done
-- Generating done
-- Build files have been written to: /var/jenkins/workspace/adamantine_master/build
[Pipeline] sh
+ make -j4
[  1%] Copying amr_test.info
[  1%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o
[  2%] Copying demo_316_short.info
[  2%] Copying demo_316_short_anisotropic.info
[  2%] Built target _var_jenkins_workspace_adamantine_master_build_bin_amr_test.info
[  2%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short.info
[  2%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_anisotropic.info
[  3%] Copying demo_316_short_scan_path.txt
[  4%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o
[  5%] Copying experimental_data_0_0.csv
[  5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_scan_path.txt
[  5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experimental_data_0_0.csv
[  6%] Building CXX object source/CMakeFiles/Adamantine.dir/DataAssimilator.cc.o
[  7%] Copying extruded_cube.msh
[  7%] Built target _var_jenkins_workspace_adamantine_master_build_bin_extruded_cube.msh
[  8%] Copying integration_2d.info
[  8%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d.info
[  9%] Copying integration_2d_ensemble.info
[  9%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_ensemble.info
[  9%] Copying integration_2d_gold.txt
[  9%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_gold.txt
[ 10%] Copying integration_3d_gold.txt
[ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold.txt
[ 11%] Copying integration_3d_gold_0.txt
[ 11%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_0.txt
[ 12%] Copying integration_3d_gold_1.txt
[ 12%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_1.txt
[ 13%] Copying material_deposition_2d.txt
[ 13%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_2d.txt
[ 14%] Copying material_deposition_3d.txt
[ 14%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_3d.txt
[ 15%] Copying material_path_test_material_deposition.txt
[ 15%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_path_test_material_deposition.txt
[ 16%] Copying raytracing_experimental_data_0_0.csv
[ 16%] Built target _var_jenkins_workspace_adamantine_master_build_bin_raytracing_experimental_data_0_0.csv
[ 17%] Copying scan_path.txt
[ 17%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path.txt
[ 18%] Copying scan_path_diagonal.txt
[ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_diagonal.txt
[ 19%] Copying scan_path_event_series.inp
[ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_event_series.inp
[ 20%] Copying scan_path_test_thermal_physics.txt
[ 20%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_test_thermal_physics.txt
[ 20%] Copying scan_path_L.txt
[ 20%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_L.txt
[ 21%] Copying scan_path_layers.txt
[ 21%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_layers.txt
[ 21%] Copying bare_plate_L_ensemble.info
[ 21%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_ensemble.info
[ 22%] Copying bare_plate_L_da.info
[ 22%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da.info
[ 23%] Copying bare_plate_L_scan_path.txt
[ 23%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path.txt
[ 24%] Copying bare_plate_L_scan_path_fast.txt
[ 24%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path_fast.txt
[ 25%] Copying bare_plate_L_expt_log.txt
[ 25%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_log.txt
[ 26%] Copying bare_plate_L_expt_data_0_0.csv
[ 26%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_0.csv
[ 27%] Copying bare_plate_L_expt_data_0_1.csv
[ 27%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_1.csv
[ 28%] Copying experiment_log_test.txt
[ 28%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experiment_log_test.txt
[ 29%] Copying bare_plate_L_da_aug_ref_log.txt
[ 29%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_log.txt
[ 30%] Copying bare_plate_L_da_aug_ref_data_0_0.csv
[ 30%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv
[ 31%] Copying bare_plate_L_da_aug_ref_data_0_1.csv
[ 31%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv
[ 32%] Copying bare_plate_L_da_augmented.info
[ 32%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_augmented.info
[ 33%] Copying thermoelastic_bare_plate.info
[ 33%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate.info
[ 33%] Copying thermoelastic_bare_plate_scan_path.txt
[ 33%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_scan_path.txt
[ 34%] Copying rays_cam-0-0_test_full.csv
[ 34%] Built target _var_jenkins_workspace_adamantine_master_build_bin_rays_cam-0-0_test_full.csv
[ 35%] Copying thermoelastic_bare_plate_add_material_scan_path.txt
[ 35%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_add_material_scan_path.txt
[ 36%] Copying integration_da_add_material.info
[ 36%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material.info
[ 37%] Copying integration_da_add_material_expt_log.txt
[ 37%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_log.txt
[ 38%] Copying integration_da_add_material_expt_pc_0_0.csv
[ 38%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_pc_0_0.csv
[ 39%] Copying integration_da_add_material_sp.txt
[ 39%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_sp.txt
[ 39%] Copying integration_da_add_material_expt_ray_0_0.csv
[ 39%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_ray_0_0.csv
[ 40%] Building CXX object source/CMakeFiles/Adamantine.dir/ElectronBeamHeatSource.cc.o
[ 41%] Building CXX object source/CMakeFiles/Adamantine.dir/Geometry.cc.o
[ 42%] Building CXX object source/CMakeFiles/Adamantine.dir/GoldakHeatSource.cc.o
[ 43%] Building CXX object source/CMakeFiles/Adamantine.dir/ImplicitOperator.cc.o
[ 43%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialProperty.cc.o
[ 44%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalOperator.cc.o
[ 45%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalPhysics.cc.o
Still waiting to schedule task
Waiting for next available executor on ‘docker’
Still waiting to schedule task
Waiting for next available executor on ‘nvidia-docker&&volta’
[ 46%] Building CXX object source/CMakeFiles/Adamantine.dir/NewtonSolver.cc.o
[ 47%] Building CXX object source/CMakeFiles/Adamantine.dir/PointCloud.cc.o
[ 48%] Building CXX object source/CMakeFiles/Adamantine.dir/PostProcessor.cc.o
[ 49%] Building CXX object source/CMakeFiles/Adamantine.dir/RayTracing.cc.o
[ 49%] Building CXX object source/CMakeFiles/Adamantine.dir/ScanPath.cc.o
[ 50%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperator.cc.o
[ 51%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysics.cc.o
[ 52%] Building CXX object source/CMakeFiles/Adamantine.dir/Timer.cc.o
[ 53%] Building CXX object source/CMakeFiles/Adamantine.dir/ensemble_management.cc.o
[ 54%] Building CXX object source/CMakeFiles/Adamantine.dir/experimental_data_utils.cc.o
[ 55%] Building CXX object source/CMakeFiles/Adamantine.dir/material_deposition.cc.o
[ 55%] Building CXX object source/CMakeFiles/Adamantine.dir/validate_input_database.cc.o
[ 56%] Linking CXX static library libAdamantine.a
[ 56%] Built target Adamantine
[ 57%] Building CXX object tests/CMakeFiles/test_geometry.dir/test_geometry.cc.o
[ 59%] Building CXX object tests/CMakeFiles/test_data_assimilator.dir/test_data_assimilator.cc.o
[ 59%] Building CXX object application/CMakeFiles/adamantine.dir/adamantine.cc.o
[ 60%] Building CXX object tests/CMakeFiles/test_heat_source.dir/test_heat_source.cc.o
[ 61%] Linking CXX executable ../bin/test_heat_source
[ 61%] Built target test_heat_source
[ 62%] Building CXX object tests/CMakeFiles/test_implicit_operator.dir/test_implicit_operator.cc.o
[ 63%] Linking CXX executable ../bin/test_geometry
[ 63%] Built target test_geometry
[ 64%] Building CXX object tests/CMakeFiles/test_integration_thermoelastic.dir/test_integration_thermoelastic.cc.o
[ 65%] Linking CXX executable ../bin/test_data_assimilator
[ 65%] Built target test_data_assimilator
[ 65%] Building CXX object tests/CMakeFiles/test_material_property.dir/test_material_property.cc.o
[ 65%] Linking CXX executable ../bin/test_implicit_operator
[ 65%] Built target test_implicit_operator
[ 66%] Building CXX object tests/CMakeFiles/test_mechanical_operator.dir/test_mechanical_operator.cc.o
[ 67%] Linking CXX executable ../bin/test_material_property
[ 67%] Built target test_material_property
[ 68%] Building CXX object tests/CMakeFiles/test_mechanical_physics.dir/test_mechanical_physics.cc.o
[ 69%] Linking CXX executable ../bin/adamantine
[ 69%] Built target adamantine
[ 70%] Building CXX object tests/CMakeFiles/test_newton_solver.dir/test_newton_solver.cc.o
[ 71%] Linking CXX executable ../bin/test_mechanical_operator
[ 72%] Linking CXX executable ../bin/test_integration_thermoelastic
[ 72%] Built target test_mechanical_operator
[ 73%] Building CXX object tests/CMakeFiles/test_post_processor.dir/test_post_processor.cc.o
[ 73%] Built target test_integration_thermoelastic
[ 74%] Building CXX object tests/CMakeFiles/test_scan_path.dir/test_scan_path.cc.o
[ 74%] Linking CXX executable ../bin/test_newton_solver
[ 74%] Built target test_newton_solver
[ 75%] Building CXX object tests/CMakeFiles/test_thermal_operator.dir/test_thermal_operator.cc.o
[ 76%] Linking CXX executable ../bin/test_scan_path
[ 76%] Built target test_scan_path
[ 77%] Building CXX object tests/CMakeFiles/test_timer.dir/test_timer.cc.o
[ 78%] Linking CXX executable ../bin/test_timer
[ 79%] Linking CXX executable ../bin/test_mechanical_physics
[ 79%] Built target test_timer
[ 80%] Building CXX object tests/CMakeFiles/test_utils.dir/test_utils.cc.o
[ 80%] Built target test_mechanical_physics
[ 81%] Building CXX object tests/CMakeFiles/test_integration_3d_amr.dir/test_integration_3d_amr.cc.o
[ 82%] Linking CXX executable ../bin/test_utils
[ 82%] Built target test_utils
[ 83%] Building CXX object tests/CMakeFiles/test_integration_da.dir/test_integration_da.cc.o
[ 84%] Linking CXX executable ../bin/test_post_processor
[ 84%] Built target test_post_processor
[ 85%] Building CXX object tests/CMakeFiles/test_integration_da_augmented.dir/test_integration_da_augmented.cc.o
[ 86%] Linking CXX executable ../bin/test_thermal_operator
[ 86%] Built target test_thermal_operator
[ 87%] Building CXX object tests/CMakeFiles/test_validate_input_database.dir/test_validate_input_database.cc.o
[ 88%] Linking CXX executable ../bin/test_integration_3d_amr
[ 88%] Built target test_integration_3d_amr
[ 88%] Building CXX object tests/CMakeFiles/test_experimental_data.dir/test_experimental_data.cc.o
[ 88%] Linking CXX executable ../bin/test_integration_da
[ 88%] Built target test_integration_da
[ 89%] Building CXX object tests/CMakeFiles/test_integration_2d.dir/test_integration_2d.cc.o
[ 90%] Linking CXX executable ../bin/test_validate_input_database
[ 90%] Built target test_validate_input_database
[ 91%] Building CXX object tests/CMakeFiles/test_integration_3d.dir/test_integration_3d.cc.o
[ 92%] Linking CXX executable ../bin/test_experimental_data
[ 92%] Built target test_experimental_data
[ 93%] Building CXX object tests/CMakeFiles/test_material_deposition.dir/test_material_deposition.cc.o
[ 94%] Linking CXX executable ../bin/test_integration_da_augmented
[ 94%] Built target test_integration_da_augmented
[ 94%] Building CXX object tests/CMakeFiles/test_thermal_physics.dir/test_thermal_physics.cc.o
[ 95%] Linking CXX executable ../bin/test_thermal_physics
[ 95%] Built target test_thermal_physics
[ 96%] Building CXX object tests/CMakeFiles/test_ensemble_management.dir/test_ensemble_management.cc.o
[ 97%] Linking CXX executable ../bin/test_material_deposition
[ 97%] Built target test_material_deposition
[ 98%] Linking CXX executable ../bin/test_integration_2d
[ 98%] Built target test_integration_2d
[ 99%] Linking CXX executable ../bin/test_integration_3d
[ 99%] Built target test_integration_3d
[100%] Linking CXX executable ../bin/test_ensemble_management
[100%] Built target test_ensemble_management
[Pipeline] sh
+ ctest --no-compress-output -R test_ -T Test
   Site: f5cdf34958b2
   Build name: Linux-c++
Create new tag: 20231219-2051 - Experimental
Test project /var/jenkins/workspace/adamantine_master/build
      Start  2: test_data_assimilator_1
 1/30 Test  #2: test_data_assimilator_1 ............   Passed    0.65 sec
      Start  3: test_geometry_1
 2/30 Test  #3: test_geometry_1 ....................   Passed    0.18 sec
      Start  4: test_heat_source_1
 3/30 Test  #4: test_heat_source_1 .................   Passed    0.17 sec
      Start  5: test_implicit_operator_1
 4/30 Test  #5: test_implicit_operator_1 ...........   Passed    0.19 sec
      Start  6: test_integration_thermoelastic_1
 5/30 Test  #6: test_integration_thermoelastic_1 ...   Passed    4.12 sec
      Start  7: test_material_property_1
 6/30 Test  #7: test_material_property_1 ...........   Passed    0.18 sec
      Start  8: test_mechanical_operator_1
 7/30 Test  #8: test_mechanical_operator_1 .........   Passed    0.69 sec
      Start  9: test_mechanical_physics_1
 8/30 Test  #9: test_mechanical_physics_1 ..........   Passed    1.42 sec
      Start 10: test_newton_solver_1
 9/30 Test #10: test_newton_solver_1 ...............   Passed    0.16 sec
      Start 11: test_post_processor_1
10/30 Test #11: test_post_processor_1 ..............   Passed    0.21 sec
      Start 12: test_scan_path_1
11/30 Test #12: test_scan_path_1 ...................   Passed    0.16 sec
      Start 13: test_thermal_operator_1
12/30 Test #13: test_thermal_operator_1 ............   Passed    0.30 sec
      Start 14: test_timer_1
13/30 Test #14: test_timer_1 .......................   Passed    0.77 sec
      Start 15: test_utils_1
14/30 Test #15: test_utils_1 .......................   Passed    0.12 sec
      Start 16: test_integration_3d_amr_1
15/30 Test #16: test_integration_3d_amr_1 ..........   Passed    0.41 sec
      Start 17: test_integration_da_1
16/30 Test #17: test_integration_da_1 ..............   Passed    4.09 sec
      Start 18: test_integration_da_augmented_1
17/30 Test #18: test_integration_da_augmented_1 ....   Passed    1.86 sec
      Start 19: test_validate_input_database_1
18/30 Test #19: test_validate_input_database_1 .....   Passed    0.16 sec
      Start 20: test_experimental_data_1
19/30 Test #20: test_experimental_data_1 ...........   Passed    1.01 sec
      Start 21: test_experimental_data_2
20/30 Test #21: test_experimental_data_2 ...........   Passed    0.19 sec
      Start 22: test_integration_2d_1
21/30 Test #22: test_integration_2d_1 ..............   Passed    0.62 sec
      Start 23: test_integration_2d_2
22/30 Test #23: test_integration_2d_2 ..............   Passed    0.52 sec
      Start 24: test_integration_3d_1
23/30 Test #24: test_integration_3d_1 ..............   Passed    2.88 sec
      Start 25: test_integration_3d_2
24/30 Test #25: test_integration_3d_2 ..............   Passed    1.71 sec
      Start 26: test_material_deposition_1
25/30 Test #26: test_material_deposition_1 .........   Passed    0.78 sec
      Start 27: test_material_deposition_2
26/30 Test #27: test_material_deposition_2 .........   Passed    0.64 sec
      Start 28: test_thermal_physics_1
27/30 Test #28: test_thermal_physics_1 .............   Passed    0.91 sec
      Start 29: test_thermal_physics_2
28/30 Test #29: test_thermal_physics_2 .............   Passed    0.82 sec
      Start 30: test_ensemble_management_1
29/30 Test #30: test_ensemble_management_1 .........   Passed    0.12 sec
      Start 31: test_ensemble_management_2
30/30 Test #31: test_ensemble_management_2 .........   Passed    0.19 sec

100% tests passed, 0 tests failed out of 30

Total Test time (real) =  26.25 sec
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
$ docker stop --time=1 f5cdf34958b2e1d67f3bafd12425d6720ed4f13e16b12fd9363d8abb7ec75c68
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_master' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes f5cdf34958b2e1d67f3bafd12425d6720ed4f13e16b12fd9363d8abb7ec75c68
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
Running on CpuNode6 in /var/jenkins/workspace/adamantine_master
[Pipeline] // node
[Pipeline] }
[Pipeline] {
[Pipeline] // stage
[Pipeline] }
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential Jenkins ORNL
Fetching changes from the remote Git repository
Fetching without tags
Checking out Revision 53a738c40e2bb6cfdf152bb2a09e30362e6db236 (master)
Commit message: "Merge pull request #251 from stvdwtt/fix_elastic_limit"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine_master/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git
 > git --version # timeout=10
 > git --version # 'git version 2.17.1'
using GIT_ASKPASS to set credentials 
 > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 53a738c40e2bb6cfdf152bb2a09e30362e6db236 # timeout=10
+ docker pull rombur/adamantine-stack:no_gpu-latest
no_gpu-latest: Pulling from rombur/adamantine-stack
Digest: sha256:8e2b1014dc4112cf7e1d6ba1c44601bfc036fc0c743a5a5ff0d64e43d757f4f1
Status: Image is up to date for rombur/adamantine-stack:no_gpu-latest
docker.io/rombur/adamantine-stack:no_gpu-latest
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:no_gpu-latest
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
CpuNode6 seems to be running inside container 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_master --volumes-from 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:no_gpu-latest cat
$ docker top 7a342c732414193fff0569f7b1e71b9d9f1862b42ab50e7cbd2ac1cef733fba8 -eo pid,comm
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
[Pipeline] dir
Running in /var/jenkins/workspace/adamantine_master/build
[Pipeline] {
[Pipeline] sh
-- Using the deal.II-9.5.0-pre installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake
-- The CXX compiler identification is GNU 11.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /opt/boost/lib/cmake/Boost-1.80.0/BoostConfig.cmake (found suitable version "1.80.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Build type: Debug
-- Configuring done
-- Generating done
-- Build files have been written to: /var/jenkins/workspace/adamantine_master/build
[Pipeline] sh
+ make -j4
[  0%] Copying demo_316_short_anisotropic.info
[  1%] Copying amr_test.info
[  1%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o
[  2%] Copying demo_316_short.info
[  2%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_anisotropic.info
[  2%] Built target _var_jenkins_workspace_adamantine_master_build_bin_amr_test.info
[  2%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short.info
[  3%] Copying demo_316_short_scan_path.txt
[  4%] Copying experimental_data_0_0.csv
[  5%] Copying extruded_cube.msh
[  5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_demo_316_short_scan_path.txt
[  5%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experimental_data_0_0.csv
[  6%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o
[  6%] Built target _var_jenkins_workspace_adamantine_master_build_bin_extruded_cube.msh
[  7%] Copying integration_2d.info
[  7%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d.info
[  8%] Copying integration_2d_ensemble.info
[  8%] Copying integration_2d_gold.txt
[  8%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_ensemble.info
[  9%] Copying integration_3d_gold.txt
[  9%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_2d_gold.txt
[ 10%] Copying integration_3d_gold_0.txt
[ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold.txt
[ 10%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_0.txt
[ 11%] Copying integration_3d_gold_1.txt
[ 12%] Copying material_deposition_2d.txt
[ 12%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_3d_gold_1.txt
[ 12%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_2d.txt
[ 13%] Copying material_deposition_3d.txt
[ 14%] Copying material_path_test_material_deposition.txt
[ 14%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_deposition_3d.txt
[ 14%] Built target _var_jenkins_workspace_adamantine_master_build_bin_material_path_test_material_deposition.txt
[ 15%] Copying raytracing_experimental_data_0_0.csv
[ 16%] Copying scan_path.txt
[ 16%] Built target _var_jenkins_workspace_adamantine_master_build_bin_raytracing_experimental_data_0_0.csv
[ 16%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path.txt
[ 17%] Copying scan_path_diagonal.txt
[ 18%] Copying scan_path_event_series.inp
[ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_diagonal.txt
[ 18%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_event_series.inp
[ 19%] Copying scan_path_test_thermal_physics.txt
[ 19%] Copying scan_path_L.txt
[ 19%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_test_thermal_physics.txt
[ 20%] Copying scan_path_layers.txt
[ 20%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_L.txt
[ 20%] Built target _var_jenkins_workspace_adamantine_master_build_bin_scan_path_layers.txt
[ 20%] Copying bare_plate_L_ensemble.info
[ 21%] Copying bare_plate_L_da.info
[ 21%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_ensemble.info
[ 21%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da.info
[ 22%] Copying bare_plate_L_scan_path_fast.txt
[ 23%] Copying bare_plate_L_scan_path.txt
[ 23%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path.txt
[ 23%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_scan_path_fast.txt
[ 24%] Copying bare_plate_L_expt_log.txt
[ 25%] Copying bare_plate_L_expt_data_0_0.csv
[ 25%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_log.txt
[ 25%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_0.csv
[ 26%] Copying bare_plate_L_expt_data_0_1.csv
[ 27%] Copying experiment_log_test.txt
[ 27%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_expt_data_0_1.csv
[ 27%] Built target _var_jenkins_workspace_adamantine_master_build_bin_experiment_log_test.txt
[ 28%] Copying bare_plate_L_da_aug_ref_log.txt
[ 29%] Copying bare_plate_L_da_aug_ref_data_0_0.csv
[ 29%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_log.txt
[ 30%] Copying bare_plate_L_da_aug_ref_data_0_1.csv
[ 30%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv
[ 31%] Building CXX object source/CMakeFiles/Adamantine.dir/DataAssimilator.cc.o
[ 31%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv
[ 32%] Copying bare_plate_L_da_augmented.info
[ 32%] Built target _var_jenkins_workspace_adamantine_master_build_bin_bare_plate_L_da_augmented.info
[ 33%] Copying thermoelastic_bare_plate.info
[ 33%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate.info
[ 33%] Copying thermoelastic_bare_plate_scan_path.txt
[ 33%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_scan_path.txt
[ 34%] Copying rays_cam-0-0_test_full.csv
[ 34%] Built target _var_jenkins_workspace_adamantine_master_build_bin_rays_cam-0-0_test_full.csv
[ 35%] Copying thermoelastic_bare_plate_add_material_scan_path.txt
[ 35%] Built target _var_jenkins_workspace_adamantine_master_build_bin_thermoelastic_bare_plate_add_material_scan_path.txt
[ 36%] Copying integration_da_add_material.info
[ 36%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material.info
[ 37%] Copying integration_da_add_material_expt_log.txt
[ 37%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_log.txt
[ 38%] Copying integration_da_add_material_expt_pc_0_0.csv
[ 38%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_pc_0_0.csv
[ 39%] Copying integration_da_add_material_sp.txt
[ 39%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_sp.txt
[ 39%] Copying integration_da_add_material_expt_ray_0_0.csv
[ 39%] Built target _var_jenkins_workspace_adamantine_master_build_bin_integration_da_add_material_expt_ray_0_0.csv
[ 40%] Building CXX object source/CMakeFiles/Adamantine.dir/ElectronBeamHeatSource.cc.o
[ 41%] Building CXX object source/CMakeFiles/Adamantine.dir/Geometry.cc.o
[ 42%] Building CXX object source/CMakeFiles/Adamantine.dir/GoldakHeatSource.cc.o
[ 43%] Building CXX object source/CMakeFiles/Adamantine.dir/ImplicitOperator.cc.o
[ 43%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialProperty.cc.o
[ 44%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalOperator.cc.o
[ 45%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalPhysics.cc.o
[ 46%] Building CXX object source/CMakeFiles/Adamantine.dir/NewtonSolver.cc.o
[ 47%] Building CXX object source/CMakeFiles/Adamantine.dir/PointCloud.cc.o
[ 48%] Building CXX object source/CMakeFiles/Adamantine.dir/PostProcessor.cc.o
[ 49%] Building CXX object source/CMakeFiles/Adamantine.dir/RayTracing.cc.o
[ 49%] Building CXX object source/CMakeFiles/Adamantine.dir/ScanPath.cc.o
[ 50%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalOperator.cc.o
[ 51%] Building CXX object source/CMakeFiles/Adamantine.dir/ThermalPhysics.cc.o
[ 52%] Building CXX object source/CMakeFiles/Adamantine.dir/Timer.cc.o
[ 53%] Building CXX object source/CMakeFiles/Adamantine.dir/ensemble_management.cc.o
[ 54%] Building CXX object source/CMakeFiles/Adamantine.dir/experimental_data_utils.cc.o
[ 55%] Building CXX object source/CMakeFiles/Adamantine.dir/material_deposition.cc.o
[ 55%] Building CXX object source/CMakeFiles/Adamantine.dir/validate_input_database.cc.o
[ 56%] Linking CXX static library libAdamantine.a
[ 56%] Built target Adamantine
[ 57%] Building CXX object application/CMakeFiles/adamantine.dir/adamantine.cc.o
[ 58%] Building CXX object tests/CMakeFiles/test_data_assimilator.dir/test_data_assimilator.cc.o
[ 59%] Building CXX object tests/CMakeFiles/test_geometry.dir/test_geometry.cc.o
[ 60%] Building CXX object tests/CMakeFiles/test_heat_source.dir/test_heat_source.cc.o
[ 61%] Linking CXX executable ../bin/test_heat_source
[ 62%] Linking CXX executable ../bin/test_geometry
[ 62%] Built target test_heat_source
[ 63%] Building CXX object tests/CMakeFiles/test_implicit_operator.dir/test_implicit_operator.cc.o
[ 63%] Built target test_geometry
[ 64%] Building CXX object tests/CMakeFiles/test_integration_thermoelastic.dir/test_integration_thermoelastic.cc.o
[ 65%] Linking CXX executable ../bin/test_data_assimilator
[ 65%] Built target test_data_assimilator
[ 65%] Building CXX object tests/CMakeFiles/test_material_property.dir/test_material_property.cc.o
[ 65%] Linking CXX executable ../bin/test_implicit_operator
[ 65%] Built target test_implicit_operator
[ 66%] Building CXX object tests/CMakeFiles/test_mechanical_operator.dir/test_mechanical_operator.cc.o
[ 67%] Linking CXX executable ../bin/test_material_property
[ 67%] Built target test_material_property
[ 68%] Building CXX object tests/CMakeFiles/test_mechanical_physics.dir/test_mechanical_physics.cc.o
[ 69%] Linking CXX executable ../bin/adamantine
[ 70%] Linking CXX executable ../bin/test_integration_thermoelastic
[ 70%] Built target test_integration_thermoelastic
[ 71%] Building CXX object tests/CMakeFiles/test_newton_solver.dir/test_newton_solver.cc.o
[ 71%] Built target adamantine
[ 72%] Building CXX object tests/CMakeFiles/test_post_processor.dir/test_post_processor.cc.o
[ 72%] Linking CXX executable ../bin/test_newton_solver
[ 72%] Built target test_newton_solver
[ 73%] Building CXX object tests/CMakeFiles/test_scan_path.dir/test_scan_path.cc.o
[ 74%] Linking CXX executable ../bin/test_mechanical_operator
[ 74%] Built target test_mechanical_operator
[ 75%] Building CXX object tests/CMakeFiles/test_thermal_operator.dir/test_thermal_operator.cc.o
[ 76%] Linking CXX executable ../bin/test_scan_path
[ 76%] Built target test_scan_path
[ 77%] Building CXX object tests/CMakeFiles/test_timer.dir/test_timer.cc.o
[ 78%] Linking CXX executable ../bin/test_mechanical_physics
[ 79%] Linking CXX executable ../bin/test_timer
[ 79%] Built target test_mechanical_physics
[ 80%] Building CXX object tests/CMakeFiles/test_utils.dir/test_utils.cc.o
[ 80%] Built target test_timer
[ 81%] Building CXX object tests/CMakeFiles/test_integration_3d_amr.dir/test_integration_3d_amr.cc.o
[ 82%] Linking CXX executable ../bin/test_utils
[ 83%] Linking CXX executable ../bin/test_post_processor
[ 83%] Built target test_utils
[ 84%] Building CXX object tests/CMakeFiles/test_integration_da.dir/test_integration_da.cc.o
[ 84%] Built target test_post_processor
[ 85%] Building CXX object tests/CMakeFiles/test_integration_da_augmented.dir/test_integration_da_augmented.cc.o
[ 86%] Linking CXX executable ../bin/test_thermal_operator
[ 86%] Built target test_thermal_operator
[ 87%] Building CXX object tests/CMakeFiles/test_validate_input_database.dir/test_validate_input_database.cc.o
[ 88%] Linking CXX executable ../bin/test_validate_input_database
[ 88%] Built target test_validate_input_database
[ 88%] Building CXX object tests/CMakeFiles/test_experimental_data.dir/test_experimental_data.cc.o
[ 89%] Linking CXX executable ../bin/test_integration_3d_amr
[ 89%] Built target test_integration_3d_amr
[ 90%] Building CXX object tests/CMakeFiles/test_integration_2d.dir/test_integration_2d.cc.o
[ 90%] Linking CXX executable ../bin/test_integration_da
[ 90%] Built target test_integration_da
[ 91%] Building CXX object tests/CMakeFiles/test_integration_3d.dir/test_integration_3d.cc.o
[ 92%] Linking CXX executable ../bin/test_experimental_data
[ 93%] Linking CXX executable ../bin/test_integration_da_augmented
[ 93%] Built target test_experimental_data
[ 94%] Building CXX object tests/CMakeFiles/test_material_deposition.dir/test_material_deposition.cc.o
[ 94%] Built target test_integration_da_augmented
[ 94%] Building CXX object tests/CMakeFiles/test_thermal_physics.dir/test_thermal_physics.cc.o
[ 95%] Linking CXX executable ../bin/test_integration_2d
[ 96%] Linking CXX executable ../bin/test_material_deposition
[ 97%] Linking CXX executable ../bin/test_thermal_physics
[ 97%] Built target test_integration_2d
[ 98%] Building CXX object tests/CMakeFiles/test_ensemble_management.dir/test_ensemble_management.cc.o
[ 99%] Linking CXX executable ../bin/test_integration_3d
[ 99%] Built target test_material_deposition
[ 99%] Built target test_thermal_physics
[ 99%] Built target test_integration_3d
[100%] Linking CXX executable ../bin/test_ensemble_management
[100%] Built target test_ensemble_management
[Pipeline] sh
+ ctest --no-compress-output -R test_ -T Test
   Site: 7a342c732414
   Build name: Linux-c++
Create new tag: 20231219-2054 - Experimental
Test project /var/jenkins/workspace/adamantine_master/build
      Start  2: test_data_assimilator_1
 1/30 Test  #2: test_data_assimilator_1 ............   Passed    0.79 sec
      Start  3: test_geometry_1
 2/30 Test  #3: test_geometry_1 ....................   Passed    0.37 sec
      Start  4: test_heat_source_1
 3/30 Test  #4: test_heat_source_1 .................   Passed    0.14 sec
      Start  5: test_implicit_operator_1
 4/30 Test  #5: test_implicit_operator_1 ...........   Passed    0.26 sec
      Start  6: test_integration_thermoelastic_1
 5/30 Test  #6: test_integration_thermoelastic_1 ...   Passed  419.12 sec
      Start  7: test_material_property_1
 6/30 Test  #7: test_material_property_1 ...........   Passed    0.19 sec
      Start  8: test_mechanical_operator_1
 7/30 Test  #8: test_mechanical_operator_1 .........   Passed   16.10 sec
      Start  9: test_mechanical_physics_1
 8/30 Test  #9: test_mechanical_physics_1 ..........   Passed   44.67 sec
      Start 10: test_newton_solver_1
 9/30 Test #10: test_newton_solver_1 ...............   Passed    0.17 sec
      Start 11: test_post_processor_1
10/30 Test #11: test_post_processor_1 ..............   Passed    3.45 sec
      Start 12: test_scan_path_1
11/30 Test #12: test_scan_path_1 ...................   Passed    0.13 sec
      Start 13: test_thermal_operator_1
12/30 Test #13: test_thermal_operator_1 ............   Passed    3.20 sec
      Start 14: test_timer_1
13/30 Test #14: test_timer_1 .......................   Passed    0.73 sec
      Start 15: test_utils_1
14/30 Test #15: test_utils_1 .......................   Passed    0.13 sec
      Start 16: test_integration_3d_amr_1
15/30 Test #16: test_integration_3d_amr_1 ..........   Passed   13.34 sec
      Start 17: test_integration_da_1
16/30 Test #17: test_integration_da_1 ..............   Passed  114.19 sec
      Start 18: test_integration_da_augmented_1
17/30 Test #18: test_integration_da_augmented_1 ....   Passed   51.67 sec
      Start 19: test_validate_input_database_1
18/30 Test #19: test_validate_input_database_1 .....   Passed    0.14 sec
      Start 20: test_experimental_data_1
19/30 Test #20: test_experimental_data_1 ...........   Passed    8.54 sec
      Start 21: test_experimental_data_2
20/30 Test #21: test_experimental_data_2 ...........   Passed    0.25 sec
      Start 22: test_integration_2d_1
21/30 Test #22: test_integration_2d_1 ..............   Passed    9.91 sec
      Start 23: test_integration_2d_2
22/30 Test #23: test_integration_2d_2 ..............   Passed    5.77 sec
      Start 24: test_integration_3d_1
23/30 Test #24: test_integration_3d_1 ..............   Passed  157.58 sec
      Start 25: test_integration_3d_2
24/30 Test #25: test_integration_3d_2 ..............   Passed   86.56 sec
      Start 26: test_material_deposition_1
25/30 Test #26: test_material_deposition_1 .........   Passed   19.21 sec
      Start 27: test_material_deposition_2
26/30 Test #27: test_material_deposition_2 .........   Passed   12.68 sec
      Start 28: test_thermal_physics_1
27/30 Test #28: test_thermal_physics_1 .............   Passed   44.56 sec
      Start 29: test_thermal_physics_2
28/30 Test #29: test_thermal_physics_2 .............   Passed   26.31 sec
      Start 30: test_ensemble_management_1
29/30 Test #30: test_ensemble_management_1 .........   Passed    0.17 sec
      Start 31: test_ensemble_management_2
30/30 Test #31: test_ensemble_management_2 .........   Passed    0.18 sec

100% tests passed, 0 tests failed out of 30

Total Test time (real) = 1040.55 sec
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
$ docker stop --time=1 7a342c732414193fff0569f7b1e71b9d9f1862b42ab50e7cbd2ac1cef733fba8
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_master' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes 7a342c732414193fff0569f7b1e71b9d9f1862b42ab50e7cbd2ac1cef733fba8
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Running on fetnat04 in /var/jenkins/workspace/adamantine_master
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential Jenkins ORNL
Cloning the remote Git repository
Cloning with configured refspecs honoured and without tags
Cloning repository https://github.com/adamantine-sim/adamantine.git
 > git init /var/jenkins/workspace/adamantine_master # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git
 > git --version # timeout=10
 > git --version # 'git version 2.17.1'
using GIT_ASKPASS to set credentials 
 > git fetch --no-tags --progress -- https://github.com/adamantine-sim/adamantine.git +refs/heads/master:refs/remotes/origin/master # timeout=10
Avoid second fetch
Checking out Revision 53a738c40e2bb6cfdf152bb2a09e30362e6db236 (master)
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 53a738c40e2bb6cfdf152bb2a09e30362e6db236 # timeout=10
Commit message: "Merge pull request #251 from stvdwtt/fix_elastic_limit"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker pull rombur/adamantine-stack:latest
latest: Pulling from rombur/adamantine-stack
Digest: sha256:73d1047f633d1d71caa64b01203f89188b511871872b35af176d0cc2dd4aedc3
Status: Image is up to date for rombur/adamantine-stack:latest
docker.io/rombur/adamantine-stack:latest
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:latest
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
fetnat04 seems to be running inside container 3918aa223c6f2f523544d9d81548de80d8b95d67ce7101a1000641e63dd426b5
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_master --volumes-from 3918aa223c6f2f523544d9d81548de80d8b95d67ce7101a1000641e63dd426b5 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:latest cat
$ docker top 731b4b530925077b2464f604b03fa587ce9896660aa964d1556178c7c887329b -eo pid,comm
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
[Pipeline] dir
Running in /var/jenkins/workspace/adamantine_master/build
[Pipeline] {
[Pipeline] sh
-- Using the deal.II-9.5.0-pre installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake
-- The CXX compiler identification is GNU 11.3.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /opt/boost/lib/cmake/Boost-1.80.0/BoostConfig.cmake (found suitable version "1.80.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Build type: Debug
-- The CUDA compiler identification is NVIDIA 11.7.99
-- Detecting CUDA compiler ABI info
-- Detecting CUDA compiler ABI info - done
-- Check for working CUDA compiler: /usr/local/cuda/bin/nvcc - skipped
-- Detecting CUDA compile features
-- Detecting CUDA compile features - done
-- Configuring done
-- Generating done
-- Build files have been written to: /var/jenkins/workspace/adamantine_master/build
[Pipeline] sh
+ make -j8
[  0%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o
[  0%] Copying amr_test.info
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/var/jenkins/workspace/adamantine_master/application/adamantine.hh(1511): warning #68-D: integer conversion resulted in a change of sign

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/var/jenkins/workspace/adamantine_master/tests/../application/adamantine.hh(1511): warning #68-D: integer conversion resulted in a change of sign

/var/jenkins/workspace/adamantine_master/tests/../application/adamantine.hh(1511): warning #68-D: integer conversion resulted in a change of sign

/var/jenkins/workspace/adamantine_master/tests/../application/adamantine.hh(1511): warning #68-D: integer conversion resulted in a change of sign

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[Pipeline] sh
+ ctest --no-compress-output -R test_ -T Test
   Site: 731b4b530925
   Build name: Linux-c++
Create new tag: 20231219-2157 - Experimental
Test project /var/jenkins/workspace/adamantine_master/build
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      Start  5: test_implicit_operator_1
 4/36 Test  #5: test_implicit_operator_1 ...........   Passed    0.58 sec
      Start  6: test_integration_thermoelastic_1
 5/36 Test  #6: test_integration_thermoelastic_1 ...   Passed  648.24 sec
      Start  7: test_material_property_1
 6/36 Test  #7: test_material_property_1 ...........   Passed    3.58 sec
      Start  8: test_mechanical_operator_1
 7/36 Test  #8: test_mechanical_operator_1 .........   Passed   26.87 sec
      Start  9: test_mechanical_physics_1
 8/36 Test  #9: test_mechanical_physics_1 ..........   Passed   62.56 sec
      Start 10: test_newton_solver_1
 9/36 Test #10: test_newton_solver_1 ...............   Passed    2.96 sec
      Start 11: test_post_processor_1
10/36 Test #11: test_post_processor_1 ..............   Passed    5.24 sec
      Start 12: test_scan_path_1
11/36 Test #12: test_scan_path_1 ...................   Passed    2.96 sec
      Start 13: test_thermal_operator_1
12/36 Test #13: test_thermal_operator_1 ............   Passed    5.17 sec
      Start 14: test_timer_1
13/36 Test #14: test_timer_1 .......................   Passed    3.56 sec
      Start 15: test_utils_1
14/36 Test #15: test_utils_1 .......................   Passed    2.96 sec
      Start 16: test_integration_3d_amr_1
15/36 Test #16: test_integration_3d_amr_1 ..........   Passed   24.89 sec
      Start 17: test_integration_da_1
16/36 Test #17: test_integration_da_1 ..............   Passed  181.86 sec
      Start 18: test_integration_da_augmented_1
17/36 Test #18: test_integration_da_augmented_1 ....   Passed   89.03 sec
      Start 19: test_validate_input_database_1
18/36 Test #19: test_validate_input_database_1 .....   Passed    2.96 sec
      Start 20: test_experimental_data_1
19/36 Test #20: test_experimental_data_1 ...........   Passed   14.18 sec
      Start 21: test_experimental_data_2
20/36 Test #21: test_experimental_data_2 ...........   Passed    3.03 sec
      Start 22: test_integration_2d_1
21/36 Test #22: test_integration_2d_1 ..............   Passed   17.98 sec
      Start 23: test_integration_2d_2
22/36 Test #23: test_integration_2d_2 ..............   Passed   11.69 sec
      Start 24: test_integration_3d_1
23/36 Test #24: test_integration_3d_1 ..............   Passed  225.32 sec
      Start 25: test_integration_3d_2
24/36 Test #25: test_integration_3d_2 ..............   Passed  125.53 sec
      Start 26: test_material_deposition_1
25/36 Test #26: test_material_deposition_1 .........   Passed   26.29 sec
      Start 27: test_material_deposition_2
26/36 Test #27: test_material_deposition_2 .........   Passed   18.59 sec
      Start 28: test_thermal_physics_1
27/36 Test #28: test_thermal_physics_1 .............   Passed   79.02 sec
      Start 29: test_thermal_physics_2
28/36 Test #29: test_thermal_physics_2 .............   Passed   46.15 sec
      Start 30: test_ensemble_management_1
29/36 Test #30: test_ensemble_management_1 .........   Passed    3.79 sec
      Start 31: test_ensemble_management_2
30/36 Test #31: test_ensemble_management_2 .........   Passed    3.01 sec
      Start 32: test_integration_2d_device_1
31/36 Test #32: test_integration_2d_device_1 .......   Passed    9.50 sec
      Start 33: test_integration_3d_device_1
32/36 Test #33: test_integration_3d_device_1 .......   Passed  545.28 sec
      Start 34: test_integration_3d_amr_device_1
33/36 Test #34: test_integration_3d_amr_device_1 ...   Passed  179.33 sec
      Start 35: test_material_property_device_1
34/36 Test #35: test_material_property_device_1 ....   Passed    3.64 sec
      Start 36: test_thermal_operator_device_1
35/36 Test #36: test_thermal_operator_device_1 .....   Passed    5.73 sec
      Start 37: test_thermal_physics_device_1
36/36 Test #37: test_thermal_physics_device_1 ......   Passed   45.56 sec

100% tests passed, 0 tests failed out of 36

Total Test time (real) = 2497.68 sec
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
$ docker stop --time=1 731b4b530925077b2464f604b03fa587ce9896660aa964d1556178c7c887329b
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_master' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes 731b4b530925077b2464f604b03fa587ce9896660aa964d1556178c7c887329b
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] End of Pipeline

GitHub has been notified of this commit’s build result

Finished: SUCCESS