Console Output

Pull request #270 updated
15:36:05 Connecting to https://api.github.com using 476720/******
Obtained ci/jenkins_config from d7ea8074e2b5ea3695b603979bbdd1bdf0c07f15+c027c323a6bb7cfa86323c6d298ae34d685c988b (2782bdfd887726dcd4e276bfe4e209a4a80b9734)
[Pipeline] Start of Pipeline
[Pipeline] withEnv
[Pipeline] {
[Pipeline] timeout
Timeout set to expire in 6 hr 0 min
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Test)
[Pipeline] parallel
[Pipeline] { (Branch: CPU)
[Pipeline] { (Branch: CUDA)
[Pipeline] stage
[Pipeline] { (CPU)
[Pipeline] stage
[Pipeline] { (CUDA)
[Pipeline] node
[Pipeline] node
Running on padirac10 in /var/jenkins/workspace/adamantine_PR-270
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential Jenkins ORNL
Fetching changes from the remote Git repository
Fetching without tags
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine_PR-270/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine.git # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine.git
 > git --version # timeout=10
 > git --version # 'git version 2.25.1'
using GIT_ASKPASS to set credentials 
 > git fetch --no-tags --force --progress -- https://github.com/adamantine-sim/adamantine.git +refs/pull/270/head:refs/remotes/origin/PR-270 +refs/heads/master:refs/remotes/origin/master # timeout=10
Merging remotes/origin/master commit c027c323a6bb7cfa86323c6d298ae34d685c988b into PR head commit d7ea8074e2b5ea3695b603979bbdd1bdf0c07f15
Merge succeeded, producing d7ea8074e2b5ea3695b603979bbdd1bdf0c07f15
Checking out Revision d7ea8074e2b5ea3695b603979bbdd1bdf0c07f15 (PR-270)
Commit message: "Remove Kelly-based AMR"
 > git config core.sparsecheckout # timeout=10
 > git checkout -f d7ea8074e2b5ea3695b603979bbdd1bdf0c07f15 # timeout=10
 > git remote # timeout=10
 > git config --get remote.origin.url # timeout=10
using GIT_ASKPASS to set credentials 
 > git merge c027c323a6bb7cfa86323c6d298ae34d685c988b # timeout=10
 > git rev-parse HEAD^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f d7ea8074e2b5ea3695b603979bbdd1bdf0c07f15 # timeout=10
 > git rev-list --no-walk c2b06d3c9546fe3b99370ae02ce83603d10621db # timeout=10
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
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[Pipeline] sh
+ docker pull rombur/adamantine-stack:no_gpu-latest
no_gpu-latest: Pulling from rombur/adamantine-stack
Digest: sha256:f852740a2e8f8902a8b7589345cdb820b7a112b4d6ffe3884ff0acee441e25f0
Status: Image is up to date for rombur/adamantine-stack:no_gpu-latest
docker.io/rombur/adamantine-stack:no_gpu-latest
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:no_gpu-latest
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
padirac10 seems to be running inside container d6251860e39f30a414638b0fb6af64bc4fc7eb73af7ecf960218b15fca107db0
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine_PR-270 --volumes-from d6251860e39f30a414638b0fb6af64bc4fc7eb73af7ecf960218b15fca107db0 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:no_gpu-latest cat
$ docker top 8dd1dd943eb54bfbfbce27ca84cd2b70bb954b8cb46dcae538c04c1828a7c554 -eo pid,comm
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
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Running in /var/jenkins/workspace/adamantine_PR-270/build
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[Pipeline] sh
-- Using the deal.II-9.5.1 installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
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-- Detecting CXX compile features
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-- Found MPI_CXX: /opt/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /opt/boost/lib/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Found Adiak: /opt/adiak
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Found Caliper: /opt/caliper
-- Build type: Debug
-- Configuring done (0.8s)
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-- Build files have been written to: /var/jenkins/workspace/adamantine_PR-270/build
[Pipeline] sh
+ make -j8
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Test project /var/jenkins/workspace/adamantine_PR-270/build
      Start  2: test_integration_da_1
 1/43 Test  #2: test_integration_da_1 ..............   Passed   43.52 sec
      Start  3: test_integration_da_2
 2/43 Test  #3: test_integration_da_2 ..............   Passed   35.74 sec
      Start  4: test_integration_da_3
 3/43 Test  #4: test_integration_da_3 ..............   Passed   30.18 sec
      Start  5: test_integration_da_6
 4/43 Test  #5: test_integration_da_6 ..............   Passed   28.09 sec
      Start  6: test_data_assimilator_1
 5/43 Test  #6: test_data_assimilator_1 ............   Passed    0.52 sec
      Start  7: test_geometry_1
 6/43 Test  #7: test_geometry_1 ....................   Passed    0.51 sec
      Start  8: test_heat_source_1
 7/43 Test  #8: test_heat_source_1 .................   Passed    0.34 sec
      Start  9: test_implicit_operator_1
 8/43 Test  #9: test_implicit_operator_1 ...........   Passed    0.39 sec
      Start 10: test_integration_3d_device_1
 9/43 Test #10: test_integration_3d_device_1 .......   Passed  445.87 sec
      Start 11: test_integration_thermoelastic_1
10/43 Test #11: test_integration_thermoelastic_1 ...   Passed  241.99 sec
      Start 12: test_material_property_1
11/43 Test #12: test_material_property_1 ...........   Passed    0.41 sec
      Start 13: test_material_property_device_1
12/43 Test #13: test_material_property_device_1 ....   Passed    0.40 sec
      Start 14: test_mechanical_operator_1
13/43 Test #14: test_mechanical_operator_1 .........   Passed   13.12 sec
      Start 15: test_mechanical_physics_1
14/43 Test #15: test_mechanical_physics_1 ..........   Passed   49.62 sec
      Start 16: test_newton_solver_1
15/43 Test #16: test_newton_solver_1 ...............   Passed    0.34 sec
      Start 17: test_post_processor_1
16/43 Test #17: test_post_processor_1 ..............   Passed    3.18 sec
      Start 18: test_scan_path_1
17/43 Test #18: test_scan_path_1 ...................   Passed    0.33 sec
      Start 19: test_thermal_operator_1
18/43 Test #19: test_thermal_operator_1 ............   Passed    2.85 sec
      Start 20: test_thermal_operator_device_1
19/43 Test #20: test_thermal_operator_device_1 .....   Passed    2.03 sec
      Start 21: test_thermal_physics_device_1
20/43 Test #21: test_thermal_physics_device_1 ......   Passed   27.22 sec
      Start 22: test_timer_1
21/43 Test #22: test_timer_1 .......................   Passed    0.94 sec
      Start 23: test_utils_1
22/43 Test #23: test_utils_1 .......................   Passed    0.33 sec
      Start 24: test_validate_input_database_1
23/43 Test #24: test_validate_input_database_1 .....   Passed    0.33 sec
      Start 25: test_experimental_data_1
24/43 Test #25: test_experimental_data_1 ...........   Passed   11.96 sec
      Start 26: test_experimental_data_2
25/43 Test #26: test_experimental_data_2 ...........   Passed    0.35 sec
      Start 27: test_integration_2d_1
26/43 Test #27: test_integration_2d_1 ..............   Passed    7.82 sec
      Start 28: test_integration_2d_2
27/43 Test #28: test_integration_2d_2 ..............   Passed    4.99 sec
      Start 29: test_integration_2d_device_1
28/43 Test #29: test_integration_2d_device_1 .......   Passed    4.08 sec
      Start 30: test_integration_2d_device_2
29/43 Test #30: test_integration_2d_device_2 .......   Passed    2.21 sec
      Start 31: test_integration_3d_1
30/43 Test #31: test_integration_3d_1 ..............   Passed  225.69 sec
      Start 32: test_integration_3d_2
31/43 Test #32: test_integration_3d_2 ..............   Passed  129.85 sec
      Start 33: test_integration_3d_amr_1
32/43 Test #33: test_integration_3d_amr_1 ..........   Passed    3.40 sec
      Start 34: test_integration_3d_amr_2
33/43 Test #34: test_integration_3d_amr_2 ..........   Passed    2.01 sec
      Start 35: test_integration_3d_amr_device_1
34/43 Test #35: test_integration_3d_amr_device_1 ...   Passed   25.36 sec
      Start 36: test_integration_3d_amr_device_2
35/43 Test #36: test_integration_3d_amr_device_2 ...   Passed   13.02 sec
      Start 37: test_integration_da_augmented_1
36/43 Test #37: test_integration_da_augmented_1 ....   Passed   39.62 sec
      Start 38: test_integration_da_augmented_2
37/43 Test #38: test_integration_da_augmented_2 ....   Passed   28.70 sec
      Start 39: test_material_deposition_1
38/43 Test #39: test_material_deposition_1 .........   Passed   11.91 sec
      Start 40: test_material_deposition_2
39/43 Test #40: test_material_deposition_2 .........   Passed    7.87 sec
      Start 41: test_thermal_physics_1
40/43 Test #41: test_thermal_physics_1 .............   Passed   20.33 sec
      Start 42: test_thermal_physics_2
41/43 Test #42: test_thermal_physics_2 .............   Passed   13.54 sec
      Start 43: test_ensemble_management_1
42/43 Test #43: test_ensemble_management_1 .........   Passed    0.35 sec
      Start 44: test_ensemble_management_2
43/43 Test #44: test_ensemble_management_2 .........   Passed    0.32 sec

100% tests passed, 0 tests failed out of 43

Total Test time (real) = 1481.67 sec
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine_PR-270' for the testing framework 'CTest-Version 3.x (default)'.
[Pipeline] }
$ docker stop --time=1 8dd1dd943eb54bfbfbce27ca84cd2b70bb954b8cb46dcae538c04c1828a7c554
$ docker rm -f --volumes 8dd1dd943eb54bfbfbce27ca84cd2b70bb954b8cb46dcae538c04c1828a7c554
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Pausing (Preparing for shutdown)
Resuming build at Wed Apr 17 16:36:43 EDT 2024 after Jenkins restart
Timeout set to expire in 4 hr 59 min
Ready to run at Wed Apr 17 16:36:43 EDT 2024
Cancelling nested steps due to timeout
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CUDA
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] End of Pipeline
Timeout has been exceeded
org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: f244a69a-7971-4cc3-8494-192f85f345f2

GitHub has been notified of this commit’s build result

Finished: ABORTED