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Pull request #1012 opened 01:58:57 Connecting to https://api.github.com using Jenkins ORNL Obtained .jenkins/continuous.groovy from c9f80004244a3c637ab6b57ef6c4669dfb7c72a6 [Pipeline] Start of Pipeline [Pipeline] withEnv [Pipeline] { [Pipeline] timeout Timeout set to expire in 3 hr 0 min [Pipeline] { [Pipeline] stage [Pipeline] { (Style) [Pipeline] node Running on CpuNode6 in /var/jenkins/workspace/ArborX_PR-1012 [Pipeline] { [Pipeline] checkout Selected Git installation does not exist. Using Default The recommended git tool is: NONE using credential Jenkins ORNL Cloning the remote Git repository Cloning with configured refspecs honoured and without tags Cloning repository https://github.com/arborx/ArborX.git > git init /var/jenkins/workspace/ArborX_PR-1012 # timeout=10 Fetching upstream changes from https://github.com/arborx/ArborX.git > git --version # timeout=10 > git --version # 'git version 2.17.1' using GIT_ASKPASS to set credentials > git fetch --no-tags --progress -- https://github.com/arborx/ArborX.git +refs/pull/1012/head:refs/remotes/origin/PR-1012 # timeout=10 Fetching without tags > git config remote.origin.url https://github.com/arborx/ArborX.git # timeout=10 > git config --add remote.origin.fetch +refs/pull/1012/head:refs/remotes/origin/PR-1012 # timeout=10 > git config remote.origin.url https://github.com/arborx/ArborX.git # timeout=10 Fetching upstream changes from https://github.com/arborx/ArborX.git using GIT_ASKPASS to set credentials > git fetch --no-tags --progress -- https://github.com/arborx/ArborX.git +refs/pull/1012/head:refs/remotes/origin/PR-1012 # timeout=10 Checking out Revision c9f80004244a3c637ab6b57ef6c4669dfb7c72a6 (PR-1012) Commit message: "Add a check for overflow of `n_results` variable in CrsGraphWrapperImpl::queryImpl function" First time build. Skipping changelog. > git config core.sparsecheckout # timeout=10 > git checkout -f c9f80004244a3c637ab6b57ef6c4669dfb7c72a6 # timeout=10 [Pipeline] withEnv [Pipeline] { [Pipeline] isUnix [Pipeline] readFile [Pipeline] sh + docker build -t ef2cefff70f0a99f05b7741a8c4219d71daa42dd --build-arg CLANG_FORMAT_VERSION=14.0.0 -f docker/Dockerfile.clang-format docker Sending build context to Docker daemon 24.58kB Step 1/5 : ARG BASE=ubuntu:18.04 Step 2/5 : FROM $BASE ---> f9a80a55f492 Step 3/5 : RUN apt-get update && DEBIAN_FRONTEND=noninteractive apt-get install -yq git wget xz-utils && apt-get clean && rm -rf /var/lib/apt/lists/* ---> Using cache ---> c30f8fbb1f0a Step 4/5 : ARG CLANG_FORMAT_VERSION=14.0.0 ---> Using cache ---> 024123de3b6c Step 5/5 : RUN CLANG_FORMAT_URL=https://github.com/llvm/llvm-project/releases/download/llvmorg-${CLANG_FORMAT_VERSION}/clang+llvm-${CLANG_FORMAT_VERSION}-x86_64-linux-gnu-ubuntu-18.04.tar.xz && CLANG_FORMAT_ARCHIVE=clang-format-$CLANG_FORMAT_VERSION.tar.xz && SCRATCH_DIR=/scratch && mkdir -p ${SCRATCH_DIR} && cd ${SCRATCH_DIR} && wget --quiet ${CLANG_FORMAT_URL} --output-document=${CLANG_FORMAT_ARCHIVE} && tar -xf ${CLANG_FORMAT_ARCHIVE} --strip-components=1 && cp bin/clang-format /usr/bin && rm -rf ${SCRATCH_DIR} ---> Using cache ---> d3f1bd9f7b76 Successfully built d3f1bd9f7b76 Successfully tagged ef2cefff70f0a99f05b7741a8c4219d71daa42dd:latest [Pipeline] isUnix [Pipeline] withEnv [Pipeline] { [Pipeline] sh + docker inspect -f . ef2cefff70f0a99f05b7741a8c4219d71daa42dd . [Pipeline] } [Pipeline] // withEnv [Pipeline] withDockerContainer CpuNode6 seems to be running inside container 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226 $ docker run -t -d -u 0:0 -w /var/jenkins/workspace/ArborX_PR-1012 --volumes-from 000334f31f8629b8eaeb6326227b7cf88da75374aa5f2bd4a8e8ac57be811226 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** ef2cefff70f0a99f05b7741a8c4219d71daa42dd cat $ docker top 127d58f906ce60a3b30f06f6ad2f30388d4b8f26bbaa2122716d2621a71e9ba8 -eo pid,comm [Pipeline] { [Pipeline] sh + ./scripts/check_format_cpp.sh --- a/src/details/ArborX_DetailsCrsGraphWrapperImpl.hpp +++ b/src/details/ArborX_DetailsCrsGraphWrapperImpl.hpp @@ -210,7 +210,8 @@ int const n_results = KokkosExt::lastElement(space, offset); - if(n_results < 0){ + if (n_results < 0) + { // overflow throw std::runtime_error("The search resulted in too many neighbor pairs. " "Please ensure the primitive positions are not " 1 file(s) not formatted properly: src/details/ArborX_DetailsCrsGraphWrapperImpl.hpp [Pipeline] } $ docker stop --time=1 127d58f906ce60a3b30f06f6ad2f30388d4b8f26bbaa2122716d2621a71e9ba8 $ docker rm -f --volumes 127d58f906ce60a3b30f06f6ad2f30388d4b8f26bbaa2122716d2621a71e9ba8 [Pipeline] // withDockerContainer [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Build) Stage "Build" skipped due to earlier failure(s) [Pipeline] parallel [Pipeline] { (Branch: CUDA-11.5.2-NVCC-CUDA-AWARE-MPI) [Pipeline] { (Branch: CUDA-11.1.1-NVCC) [Pipeline] { (Branch: CUDA-11.0.3-Clang) [Pipeline] { (Branch: Clang) [Pipeline] { (Branch: GCC-12.2) [Pipeline] { (Branch: HIP-5.3.3) [Pipeline] { (Branch: SYCL) [Pipeline] stage [Pipeline] { (CUDA-11.5.2-NVCC-CUDA-AWARE-MPI) [Pipeline] stage [Pipeline] { (CUDA-11.1.1-NVCC) [Pipeline] stage [Pipeline] { (CUDA-11.0.3-Clang) [Pipeline] stage [Pipeline] { (Clang) [Pipeline] stage [Pipeline] { (GCC-12.2) [Pipeline] stage [Pipeline] { (HIP-5.3.3) [Pipeline] stage [Pipeline] { (SYCL) Stage "CUDA-11.5.2-NVCC-CUDA-AWARE-MPI" skipped due to earlier failure(s) [Pipeline] } Stage "CUDA-11.1.1-NVCC" skipped due to earlier failure(s) [Pipeline] } Stage "CUDA-11.0.3-Clang" skipped due to earlier failure(s) [Pipeline] } Stage "Clang" skipped due to earlier failure(s) [Pipeline] } Stage "GCC-12.2" skipped due to earlier failure(s) [Pipeline] } Stage "HIP-5.3.3" skipped due to earlier failure(s) [Pipeline] } Stage "SYCL" skipped due to earlier failure(s) [Pipeline] } [Pipeline] // stage [Pipeline] // stage [Pipeline] // stage [Pipeline] // stage [Pipeline] // stage [Pipeline] // stage [Pipeline] // stage [Pipeline] } Failed in branch CUDA-11.5.2-NVCC-CUDA-AWARE-MPI [Pipeline] } Failed in branch CUDA-11.1.1-NVCC [Pipeline] } Failed in branch CUDA-11.0.3-Clang [Pipeline] } Failed in branch Clang [Pipeline] } Failed in branch GCC-12.2 [Pipeline] } Failed in branch HIP-5.3.3 [Pipeline] } Failed in branch SYCL [Pipeline] // parallel [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] node Running on CpuNode5 in /var/jenkins/workspace/ArborX_PR-1012 [Pipeline] { [Pipeline] } [Pipeline] // node Error when executing always post condition: Also: org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: f42b8a88-09a5-421a-9ad0-8e5993377aad java.lang.NoSuchMethodError: No such DSL method 'cmake' found among steps [archive, bat, catchError, checkout, deleteDir, dir, dockerFingerprintFrom, dockerFingerprintRun, echo, envVarsForTool, error, fileExists, getContext, git, input, isUnix, junit, library, libraryResource, load, mail, node, parallel, powershell, properties, publishChecks, pwd, pwsh, readFile, readTrusted, resolveScm, retry, script, sh, sleep, stage, stash, step, timeout, tm, tool, unarchive, unstable, unstash, validateDeclarativePipeline, waitUntil, warnError, withChecks, withContext, withCredentials, withDockerContainer, withDockerRegistry, withDockerServer, withEnv, wrap, writeFile, ws, xunit] or symbols [AUnit, BoostTest, CTest, CUnit, Check, CppTest, CppUnit, Custom, FPCUnit, GitUsernamePassword, GoogleTest, JUnit, MSTest, MbUnit, NUnit2, NUnit3, PHPUnit, QtTest, UnitTest, Valgrind, agent, all, allBranchesSame, allOf, always, any, anyOf, apiToken, apiTokenProperty, architecture, archiveArtifacts, artifactManager, assembla, authorInChangelog, batchFile, bitbucket, bitbucketServer, booleanParam, branch, browser, buildButton, buildDiscarder, buildDiscarders, buildRetention, buildSingleRevisionOnly, buildingTag, builtInNode, caseInsensitive, caseSensitive, certificate, cgit, changeRequest, changelog, changelogBase, changelogToBranch, changeset, checkoutOption, checkoutToSubdirectory, choice, choiceParam, cleanAfterCheckout, cleanBeforeCheckout, clock, cloneOption, command, credentials, cron, crumb, defaultDisplayUrlProvider, defaultFolderConfiguration, defaultView, demand, disableConcurrentBuilds, disableRestartFromStage, disableResume, discoverOtherRefs, discoverOtherRefsTrait, docker, dockerCert, dockerServer, dockerTool, dockerfile, downstream, dumb, durabilityHint, embUnit, envVars, envVarsFilter, environment, equals, experimentalFlags, expression, failed, file, fileParam, filePath, fingerprint, fingerprints, fisheye, frameOptions, freeStyle, freeStyleJob, fromDocker, fromScm, fromSource, git, gitBranchDiscovery, gitHooks, gitHubBranchDiscovery, gitHubBranchHeadAuthority, gitHubExcludeArchivedRepositories, gitHubExcludeForkedRepositories, gitHubExcludePrivateRepositories, gitHubExcludePublicRepositories, gitHubForkDiscovery, gitHubIgnoreDraftPullRequestFilter, gitHubPullRequestDiscovery, gitHubSshCheckout, gitHubTagDiscovery, gitHubTopicsFilter, gitHubTrustContributors, gitHubTrustEveryone, gitHubTrustNobody, gitHubTrustPermissions, gitLab, gitList, gitSCM, gitTagDiscovery, gitTool, gitUsernamePassword, gitWeb, gitblit, github, githubAccessToken, githubProjectProperty, githubPush, gitiles, gogs, gtester, headRegexFilter, headWildcardFilter, hyperlink, hyperlinkToModels, ignoreOnPush, inbound, installSource, isRestartedRun, issueCommentTrigger, jdk, jgit, jgitapache, jnlp, jobBuildDiscarder, jobName, junitTestResultStorage, kiln, label, labelAddedTrigger, lastDuration, lastFailure, lastGrantedAuthorities, lastStable, lastSuccess, legacy, legacySCM, lfs, list, local, localBranch, localBranchTrait, location, logRotator, loggedInUsersCanDoAnything, mailer, masterBuild, maven, maven3Mojos, mavenErrors, mavenGlobalConfig, mavenMojos, mavenWarnings, modernSCM, multiBranchProjectDisplayNaming, multibranch, myView, namedBranchesDifferent, newContainerPerStage, node, nodeProperties, none, nonresumable, not, organizationFolder, overrideIndexTriggers, paneStatus, parallelsAlwaysFailFast, parameters, passed, password, pattern, perBuildTag, permanent, phabricator, pipeline, pipeline-model, pipeline-model-docker, pipelineTriggers, plainText, plugin, pollSCM, preserveStashes, projectNamingStrategy, proxy, pruneStaleBranch, pruneStaleTag, pruneTags, pullRequestReview, queueItemAuthenticator, quietPeriod, rateLimit, rateLimitBuilds, redmine, refSpecs, remoteName, resourceRoot, retainOnlyVariables, rhodeCode, run, runParam, schedule, scmGit, scmRetryCount, scmSkip, scriptApproval, scriptApprovalLink, search, security, shell, simpleBuildDiscarder, skipDefaultCheckout, skipStagesAfterUnstable, skipped, slave, sourceRegexFilter, sourceWildcardFilter, sparseCheckoutPaths, sshUserPrivateKey, standard, status, string, stringParam, submodule, submoduleOption, suppressAutomaticTriggering, suppressFolderAutomaticTriggering, swapSpace, tag, teamFoundation, teamSlugFilter, text, textParam, timezone, tmpSpace, toolLocation, triggeredBy, unsecured, untrusted, upstream, userIdentity, userSeed, usernameColonPassword, usernamePassword, viewgit, viewsTabBar, weather, x509ClientCert, xUnitDotNet, zip] or globals [currentBuild, docker, env, params, pipeline, pullRequest, scm] at org.jenkinsci.plugins.workflow.cps.DSL.invokeMethod(DSL.java:219) at org.jenkinsci.plugins.workflow.cps.CpsScript.invokeMethod(CpsScript.java:124) at jdk.internal.reflect.GeneratedMethodAccessor45101.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:98) at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:325) at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1225) at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1034) at org.codehaus.groovy.runtime.callsite.PogoMetaClassSite.call(PogoMetaClassSite.java:41) at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47) at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116) at org.kohsuke.groovy.sandbox.impl.Checker$1.call(Checker.java:180) at org.kohsuke.groovy.sandbox.GroovyInterceptor.onMethodCall(GroovyInterceptor.java:23) at org.jenkinsci.plugins.scriptsecurity.sandbox.groovy.SandboxInterceptor.onMethodCall(SandboxInterceptor.java:163) at org.kohsuke.groovy.sandbox.impl.Checker$1.call(Checker.java:178) at org.kohsuke.groovy.sandbox.impl.Checker.checkedCall(Checker.java:182) at org.kohsuke.groovy.sandbox.impl.Checker.checkedCall(Checker.java:152) at org.kohsuke.groovy.sandbox.impl.Checker.checkedCall(Checker.java:152) at com.cloudbees.groovy.cps.sandbox.SandboxInvoker.methodCall(SandboxInvoker.java:17) at org.jenkinsci.plugins.workflow.cps.LoggingInvoker.methodCall(LoggingInvoker.java:105) at WorkflowScript.run(WorkflowScript:485) at ___cps.transform___(Native Method) at com.cloudbees.groovy.cps.impl.ContinuationGroup.methodCall(ContinuationGroup.java:90) at com.cloudbees.groovy.cps.impl.FunctionCallBlock$ContinuationImpl.dispatchOrArg(FunctionCallBlock.java:116) at com.cloudbees.groovy.cps.impl.FunctionCallBlock$ContinuationImpl.fixName(FunctionCallBlock.java:80) at jdk.internal.reflect.GeneratedMethodAccessor192.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.cloudbees.groovy.cps.impl.ContinuationPtr$ContinuationImpl.receive(ContinuationPtr.java:72) at com.cloudbees.groovy.cps.impl.ConstantBlock.eval(ConstantBlock.java:21) at com.cloudbees.groovy.cps.Next.step(Next.java:83) at com.cloudbees.groovy.cps.Continuable$1.call(Continuable.java:152) at com.cloudbees.groovy.cps.Continuable$1.call(Continuable.java:146) at org.codehaus.groovy.runtime.GroovyCategorySupport$ThreadCategoryInfo.use(GroovyCategorySupport.java:136) at org.codehaus.groovy.runtime.GroovyCategorySupport.use(GroovyCategorySupport.java:275) at com.cloudbees.groovy.cps.Continuable.run0(Continuable.java:146) at org.jenkinsci.plugins.workflow.cps.SandboxContinuable.access$001(SandboxContinuable.java:18) at org.jenkinsci.plugins.workflow.cps.SandboxContinuable.run0(SandboxContinuable.java:51) at org.jenkinsci.plugins.workflow.cps.CpsThread.runNextChunk(CpsThread.java:187) at org.jenkinsci.plugins.workflow.cps.CpsThreadGroup.run(CpsThreadGroup.java:423) at org.jenkinsci.plugins.workflow.cps.CpsThreadGroup$2.call(CpsThreadGroup.java:331) at org.jenkinsci.plugins.workflow.cps.CpsThreadGroup$2.call(CpsThreadGroup.java:295) at org.jenkinsci.plugins.workflow.cps.CpsVmExecutorService$2.call(CpsVmExecutorService.java:97) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at hudson.remoting.SingleLaneExecutorService$1.run(SingleLaneExecutorService.java:139) at jenkins.util.ContextResettingExecutorService$1.run(ContextResettingExecutorService.java:28) at jenkins.security.ImpersonatingExecutorService$1.run(ImpersonatingExecutorService.java:68) at jenkins.util.ErrorLoggingExecutorService.lambda$wrap$0(ErrorLoggingExecutorService.java:51) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) at java.base/java.lang.Thread.run(Thread.java:833) [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // timeout [Pipeline] } [Pipeline] // withEnv [Pipeline] End of Pipeline ERROR: script returned exit code 1 GitHub has been notified of this commit’s build result Finished: FAILURE