Console Output

GitHub pull request #259 of commit 6f71f62d2a2116f423d408e7ce53c740c1b102c5, no merge conflicts.
Setting status of 6f71f62d2a2116f423d408e7ce53c740c1b102c5 to PENDING with url https://cloud.cees.ornl.gov/jenkins-ci/job/Cap-experimental/104/ and message: 'Build started sha1 is merged.'
Using context: continuous-integration/jenkin-ci/pr
Building remotely on cathode in workspace /var/jenkins/workspace/Cap-experimental
 > /usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > /usr/bin/git config remote.origin.url https://github.com/ORNL-CEES/Cap # timeout=10
Fetching upstream changes from https://github.com/ORNL-CEES/Cap
 > /usr/bin/git --version # timeout=10
 > /usr/bin/git fetch --tags --progress https://github.com/ORNL-CEES/Cap +refs/pull/*:refs/remotes/origin/pr/*
 > /usr/bin/git rev-parse 6f71f62d2a2116f423d408e7ce53c740c1b102c5^{commit} # timeout=10
Checking out Revision 6f71f62d2a2116f423d408e7ce53c740c1b102c5 (detached)
Commit message: "Create a cheat sheet of the parameters that define a supercapacitor."
 > /usr/bin/git config core.sparsecheckout # timeout=10
 > /usr/bin/git checkout -f 6f71f62d2a2116f423d408e7ce53c740c1b102c5
 > /usr/bin/git rev-list 5b9713780a7fdb730f16b0ca9a814b545e9971f3 # timeout=10
[Cap-experimental] $ /bin/sh -xe /tmp/jenkins2157171149094439866.sh
+ cd /var/jenkins/workspace/Cap-experimental/docker/jenkins
+ ./docker-run.sh
Pulling ci (dalg24/cap-stack:debug)...
debug: Pulling from dalg24/cap-stack
Digest: sha256:6338ba16d545f5974024365614396952017028274715f252242063e24fddd537
Status: Image is up to date for dalg24/cap-stack:debug
ci uses an image, skipping
Creating network "jenkinscapexperimental104_default" with the default driver
-- The CXX compiler identification is GNU 5.4.0
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so  
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
  Imported targets not available for Boost version 106300
Call Stack (most recent call first):
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
  /usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
  cmake/SetupTPLs.cmake:22 (find_package)
  CMakeLists.txt:6 (include)


-- Boost version: 1.63.0
-- Found the following Boost libraries:
--   python
--   mpi
--   serialization
--   unit_test_framework
--   chrono
--   timer
--   system
--   filesystem
--   iostreams
--   regex
-- Found PythonInterp: /usr/local/bin/python (found version "3.5.2") 
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.5m.so (found version "3.5.2") 
MPI4PY_INCLUDE_DIR=/usr/local/lib/python3.5/dist-packages/mpi4py/include

-- Using the deal.II-8.5.1 installation found at /opt/dealii/8.5.1
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_setup_target.cmake
Cap version: 0.1.0
Build type: Debug
-- Found Git: /usr/bin/git (found version "2.7.4") 
GIT_HEAD_REF=HEAD
GIT_COMMIT_HASH=6f71f62d2a2116f423d408e7ce53c740c1b102c5
GIT_BRANCH=HEAD
GIT_REMOTE_URL=https://github.com/ORNL-CEES/Cap
-- Found clang-format: /usr/bin/clang-format-3.7
-- Found autopep8: /usr/local/bin/autopep8
-- Configuring done
-- Generating done
-- Build files have been written to: /var/jenkins/workspace/Cap-experimental/build
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GIT_COMMIT_HASH=6f71f62d2a2116f423d408e7ce53c740c1b102c5
GIT_BRANCH=HEAD
GIT_REMOTE_URL=https://github.com/ORNL-CEES/Cap
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   Site: 946901e1c6b5
   Build name: Linux-c++
Create new tag: 20170912-2108 - Experimental
Test project /var/jenkins/workspace/Cap-experimental/build
      Start  1: check_format_cpp
      Start  2: check_format_py
      Start  3: test_parse_params_cpp_1
      Start  4: test_energy_storage_device_cpp_1
      Start  5: test_resistor_capacitor_circuit_cpp_1
      Start  6: test_resistor_capacitor_circuit-2_cpp_1
      Start  7: test_timer_cpp_1
      Start  8: test_geometry_cpp_1
 1/31 Test  #5: test_resistor_capacitor_circuit_cpp_1 ......   Passed    1.61 sec
 2/31 Test  #1: check_format_cpp ...........................   Passed    1.92 sec
 3/31 Test  #3: test_parse_params_cpp_1 ....................   Passed    1.92 sec
 4/31 Test  #2: check_format_py ............................   Passed    1.92 sec
      Start  9: test_postprocessor_cpp_1
      Start 10: test_mp_values_cpp_1
      Start 11: test_equivalent_circuit_cpp_1
      Start 12: test_exact_transient_solution_cpp_1
 5/31 Test  #6: test_resistor_capacitor_circuit-2_cpp_1 ....   Passed    2.22 sec
 6/31 Test  #7: test_timer_cpp_1 ...........................   Passed    2.22 sec
      Start 13: test_supercapacitor_cpp_1
      Start 15: test_distributed_energy_storage_cpp_1
 7/31 Test  #4: test_energy_storage_device_cpp_1 ...........   Passed    5.94 sec
      Start 19: test_supercapacitor_2d_vs_3d_cpp_1
 8/31 Test #10: test_mp_values_cpp_1 .......................   Passed    5.03 sec
      Start 22: test_property_tree_wrappers_py_1
 9/31 Test #15: test_distributed_energy_storage_cpp_1 ......   Passed    4.82 sec
      Start 23: test_energy_storage_device_wrappers_py_1
10/31 Test  #9: test_postprocessor_cpp_1 ...................   Passed   15.35 sec
      Start 24: test_end_criterion_py_1
11/31 Test #22: test_property_tree_wrappers_py_1 ...........   Passed   13.13 sec
      Start 25: test_time_evolution_py_1
12/31 Test #13: test_supercapacitor_cpp_1 ..................   Passed   18.39 sec
      Start 26: test_stage_py_1
13/31 Test #24: test_end_criterion_py_1 ....................   Passed    8.47 sec
      Start 27: test_charge_discharge_py_1
14/31 Test #11: test_equivalent_circuit_cpp_1 ..............   Passed   26.42 sec
15/31 Test #25: test_time_evolution_py_1 ...................   Passed    8.36 sec
      Start 14: test_checkpoint_restart_cpp_2
16/31 Test #26: test_stage_py_1 ............................   Passed    8.82 sec
      Start 28: test_voltammetry_py_1
17/31 Test #14: test_checkpoint_restart_cpp_2 ..............   Passed    6.62 sec
18/31 Test #27: test_charge_discharge_py_1 .................   Passed    9.72 sec
      Start 16: test_distributed_energy_storage_cpp_2
      Start 29: test_ragone_plot_py_1
19/31 Test  #8: test_geometry_cpp_1 ........................   Passed   37.86 sec
      Start 30: test_impedance_spectroscopy_py_1
20/31 Test #23: test_energy_storage_device_wrappers_py_1 ...   Passed   30.02 sec
      Start 31: test_observer_pattern_py_1
21/31 Test #28: test_voltammetry_py_1 ......................   Passed    8.23 sec
22/31 Test #16: test_distributed_energy_storage_cpp_2 ......   Passed    4.12 sec
      Start 18: test_supercapacitor_inspector_cpp_2
23/31 Test #12: test_exact_transient_solution_cpp_1 ........   Passed   38.26 sec
      Start 20: test_supercapacitor_2d_vs_3d_cpp_2
24/31 Test #19: test_supercapacitor_2d_vs_3d_cpp_1 .........   Passed   34.75 sec
25/31 Test #18: test_supercapacitor_inspector_cpp_2 ........   Passed    2.71 sec
26/31 Test #31: test_observer_pattern_py_1 .................   Passed    6.17 sec
      Start 17: test_distributed_energy_storage_cpp_4
27/31 Test #17: test_distributed_energy_storage_cpp_4 ......   Passed    0.61 sec
      Start 21: test_supercapacitor_2d_vs_3d_cpp_4
28/31 Test #21: test_supercapacitor_2d_vs_3d_cpp_4 .........   Passed    2.21 sec
29/31 Test #20: test_supercapacitor_2d_vs_3d_cpp_2 .........   Passed   11.58 sec
30/31 Test #30: test_impedance_spectroscopy_py_1 ...........   Passed   42.97 sec
31/31 Test #29: test_ragone_plot_py_1 ......................   Passed   50.95 sec

100% tests passed, 0 tests failed out of 31

Total Test time (real) =  86.82 sec
[xUnit] [INFO] - Starting to record.
[xUnit] [INFO] - Processing CTest-Version N/A (default)
[xUnit] [INFO] - [CTest-Version N/A (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/Cap-experimental' for the testing framework 'CTest-Version N/A (default)'.
[xUnit] [INFO] - Check 'Failed Tests' threshold.
[xUnit] [INFO] - Check 'Skipped Tests' threshold.
[xUnit] [INFO] - Setting the build status to SUCCESS
[xUnit] [INFO] - Stopping recording.
[WARNINGS] Parsing warnings in console log with parser GNU Make + GNU C Compiler (gcc)
<Git Blamer> Using GitBlamer to create author and commit information for all warnings.
<Git Blamer> GIT_COMMIT=c4c2a489b8c79e5f656ba4e5f02b1692a69ee204, workspace=/var/jenkins/workspace/Cap-experimental
[WARNINGS] Computing warning deltas based on reference build #103
Setting status of 6f71f62d2a2116f423d408e7ce53c740c1b102c5 to SUCCESS with url https://cloud.cees.ornl.gov/jenkins-ci/job/Cap-experimental/104/ and message: 'Build finished. '
Using context: continuous-integration/jenkin-ci/pr
Finished: SUCCESS