Console Output
GitHub pull request #257 of commit d138f8ff03ac0d689bdbabce57fac629e91ba4c8, no merge conflicts.
Setting status of d138f8ff03ac0d689bdbabce57fac629e91ba4c8 to PENDING with url https://cloud.cees.ornl.gov/jenkins-ci/job/Cap-experimental/100/ and message: 'Build started sha1 is merged.'
Using context: continuous-integration/jenkin-ci/pr
Building remotely on cathode in workspace /var/jenkins/workspace/Cap-experimental
> /usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> /usr/bin/git config remote.origin.url https://github.com/ORNL-CEES/Cap # timeout=10
Fetching upstream changes from https://github.com/ORNL-CEES/Cap
> /usr/bin/git --version # timeout=10
> /usr/bin/git fetch --tags --progress https://github.com/ORNL-CEES/Cap +refs/pull/*:refs/remotes/origin/pr/*
> /usr/bin/git rev-parse d138f8ff03ac0d689bdbabce57fac629e91ba4c8^{commit} # timeout=10
Checking out Revision d138f8ff03ac0d689bdbabce57fac629e91ba4c8 (detached)
Commit message: "Replace BOOST_FOREACH by range for loop"
> /usr/bin/git config core.sparsecheckout # timeout=10
> /usr/bin/git checkout -f d138f8ff03ac0d689bdbabce57fac629e91ba4c8
> /usr/bin/git rev-list 546435a689949d258713c6398b4c2beb007230a0 # timeout=10
[Cap-experimental] $ /bin/sh -xe /tmp/jenkins6148451693846050554.sh
+ cd /var/jenkins/workspace/Cap-experimental/docker/jenkins
+ ./docker-run.sh
Pulling ci (dalg24/cap-stack:debug)...
debug: Pulling from dalg24/cap-stack
Digest: sha256:6338ba16d545f5974024365614396952017028274715f252242063e24fddd537
Status: Image is up to date for dalg24/cap-stack:debug
ci uses an image, skipping
Creating network "jenkinscapexperimental100_default" with the default driver
-- The CXX compiler identification is GNU 5.4.0
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
CMake Warning at /usr/share/cmake-3.5/Modules/FindBoost.cmake:725 (message):
Imported targets not available for Boost version 106300
Call Stack (most recent call first):
/usr/share/cmake-3.5/Modules/FindBoost.cmake:763 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.5/Modules/FindBoost.cmake:1332 (_Boost_MISSING_DEPENDENCIES)
cmake/SetupTPLs.cmake:22 (find_package)
CMakeLists.txt:6 (include)
-- Boost version: 1.63.0
-- Found the following Boost libraries:
-- python
-- mpi
-- serialization
-- unit_test_framework
-- chrono
-- timer
-- system
-- filesystem
-- iostreams
-- regex
-- Found PythonInterp: /usr/local/bin/python (found version "3.5.2")
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.5m.so (found version "3.5.2")
MPI4PY_INCLUDE_DIR=/usr/local/lib/python3.5/dist-packages/mpi4py/include
-- Using the deal.II-8.5.1 installation found at /opt/dealii/8.5.1
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/8.5.1/share/deal.II/macros/macro_deal_ii_setup_target.cmake
Cap version: 0.1.0
Build type: Debug
-- Found Git: /usr/bin/git (found version "2.7.4")
GIT_HEAD_REF=HEAD
GIT_COMMIT_HASH=d138f8ff03ac0d689bdbabce57fac629e91ba4c8
GIT_BRANCH=HEAD
GIT_REMOTE_URL=https://github.com/ORNL-CEES/Cap
-- Found clang-format: /usr/bin/clang-format-3.7
-- Found autopep8: /usr/local/bin/autopep8
-- Configuring done
-- Generating done
-- Build files have been written to: /var/jenkins/workspace/Cap-experimental/build
Scanning dependencies of target version.cc
Scanning dependencies of target _var_jenkins_workspace_Cap-experimental_build_cpp_test_super_capacitor.info
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Scanning dependencies of target _var_jenkins_workspace_Cap-experimental_build_cpp_test_parallel_rc.info
[ 1%] Copying super_capacitor.info
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GIT_HEAD_REF=HEAD
GIT_COMMIT_HASH=d138f8ff03ac0d689bdbabce57fac629e91ba4c8
GIT_BRANCH=HEAD
GIT_REMOTE_URL=https://github.com/ORNL-CEES/Cap
[ 7%] Built target _var_jenkins_workspace_Cap-experimental_build_cpp_test_read_mesh.info
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Scanning dependencies of target _var_jenkins_workspace_Cap-experimental_build_python_test_mesh_2d.ucd
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[ 31%] Built target _var_jenkins_workspace_Cap-experimental_build_python_test_super_capacitor.info
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Scanning dependencies of target Cap
[ 42%] Building CXX object cpp/CMakeFiles/Cap.dir/source/version.cc.o
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Scanning dependencies of target test_parse_params.exe
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[ 57%] Building CXX object cpp/test/CMakeFiles/test_parse_params.exe.dir/test_parse_params.cc.o
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[ 63%] Building CXX object cpp/test/CMakeFiles/test_exact_transient_solution.exe.dir/test_exact_transient_solution.cc.o
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Scanning dependencies of target PyCap
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Site: 1a1b44237130
Build name: Linux-c++
Create new tag: 20170822-0003 - Experimental
Test project /var/jenkins/workspace/Cap-experimental/build
Start 1: check_format_cpp
Start 2: check_format_py
Start 3: test_parse_params_cpp_1
Start 4: test_energy_storage_device_cpp_1
Start 5: test_resistor_capacitor_circuit_cpp_1
Start 6: test_resistor_capacitor_circuit-2_cpp_1
Start 7: test_timer_cpp_1
Start 8: test_geometry_cpp_1
1/31 Test #2: check_format_py ............................ Passed 1.49 sec
Start 9: test_postprocessor_cpp_1
2/31 Test #3: test_parse_params_cpp_1 .................... Passed 1.59 sec
3/31 Test #5: test_resistor_capacitor_circuit_cpp_1 ...... Passed 1.69 sec
4/31 Test #1: check_format_cpp ........................... Passed 1.90 sec
Start 10: test_mp_values_cpp_1
Start 11: test_equivalent_circuit_cpp_1
Start 12: test_exact_transient_solution_cpp_1
5/31 Test #7: test_timer_cpp_1 ........................... Passed 2.29 sec
6/31 Test #6: test_resistor_capacitor_circuit-2_cpp_1 .... Passed 2.29 sec
Start 13: test_supercapacitor_cpp_1
Start 15: test_distributed_energy_storage_cpp_1
7/31 Test #4: test_energy_storage_device_cpp_1 ........... Passed 6.71 sec
8/31 Test #10: test_mp_values_cpp_1 ....................... Passed 5.12 sec
Start 14: test_checkpoint_restart_cpp_2
9/31 Test #15: test_distributed_energy_storage_cpp_1 ...... Passed 4.71 sec
Start 19: test_supercapacitor_2d_vs_3d_cpp_1
10/31 Test #14: test_checkpoint_restart_cpp_2 .............. Passed 6.62 sec
Start 16: test_distributed_energy_storage_cpp_2
11/31 Test #9: test_postprocessor_cpp_1 ................... Passed 14.95 sec
Start 22: test_property_tree_wrappers_py_1
12/31 Test #16: test_distributed_energy_storage_cpp_2 ...... Passed 3.90 sec
Start 18: test_supercapacitor_inspector_cpp_2
13/31 Test #18: test_supercapacitor_inspector_cpp_2 ........ Passed 2.69 sec
Start 20: test_supercapacitor_2d_vs_3d_cpp_2
14/31 Test #13: test_supercapacitor_cpp_1 .................. Passed 19.14 sec
Start 23: test_energy_storage_device_wrappers_py_1
15/31 Test #11: test_equivalent_circuit_cpp_1 .............. Passed 26.57 sec
Start 24: test_end_criterion_py_1
16/31 Test #22: test_property_tree_wrappers_py_1 ........... Passed 14.02 sec
Start 25: test_time_evolution_py_1
17/31 Test #24: test_end_criterion_py_1 .................... Passed 9.02 sec
18/31 Test #8: test_geometry_cpp_1 ........................ Passed 38.63 sec
Start 26: test_stage_py_1
Start 27: test_charge_discharge_py_1
19/31 Test #25: test_time_evolution_py_1 ................... Passed 9.18 sec
Start 28: test_voltammetry_py_1
20/31 Test #20: test_supercapacitor_2d_vs_3d_cpp_2 ......... Passed 22.44 sec
21/31 Test #19: test_supercapacitor_2d_vs_3d_cpp_1 ......... Passed 35.54 sec
Start 29: test_ragone_plot_py_1
Start 30: test_impedance_spectroscopy_py_1
Start 31: test_observer_pattern_py_1
22/31 Test #26: test_stage_py_1 ............................ Passed 8.43 sec
23/31 Test #12: test_exact_transient_solution_cpp_1 ........ Passed 45.58 sec
24/31 Test #27: test_charge_discharge_py_1 ................. Passed 9.23 sec
25/31 Test #28: test_voltammetry_py_1 ...................... Passed 8.32 sec
26/31 Test #23: test_energy_storage_device_wrappers_py_1 ... Passed 26.83 sec
Start 17: test_distributed_energy_storage_cpp_4
27/31 Test #17: test_distributed_energy_storage_cpp_4 ...... Passed 0.55 sec
28/31 Test #31: test_observer_pattern_py_1 ................. Passed 6.54 sec
Start 21: test_supercapacitor_2d_vs_3d_cpp_4
29/31 Test #21: test_supercapacitor_2d_vs_3d_cpp_4 ......... Passed 2.11 sec
30/31 Test #30: test_impedance_spectroscopy_py_1 ........... Passed 39.90 sec
31/31 Test #29: test_ragone_plot_py_1 ...................... Passed 46.15 sec
100% tests passed, 0 tests failed out of 31
Total Test time (real) = 89.62 sec
[xUnit] [INFO] - Starting to record.
[xUnit] [INFO] - Processing CTest-Version N/A (default)
[xUnit] [INFO] - [CTest-Version N/A (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/Cap-experimental' for the testing framework 'CTest-Version N/A (default)'.
[xUnit] [INFO] - Check 'Failed Tests' threshold.
[xUnit] [INFO] - Check 'Skipped Tests' threshold.
[xUnit] [INFO] - Setting the build status to SUCCESS
[xUnit] [INFO] - Stopping recording.
[WARNINGS] Parsing warnings in console log with parser GNU Make + GNU C Compiler (gcc)
<Git Blamer> Using GitBlamer to create author and commit information for all warnings.
<Git Blamer> GIT_COMMIT=546435a689949d258713c6398b4c2beb007230a0, workspace=/var/jenkins/workspace/Cap-experimental
[WARNINGS] Computing warning deltas based on reference build #99
Setting status of d138f8ff03ac0d689bdbabce57fac629e91ba4c8 to SUCCESS with url https://cloud.cees.ornl.gov/jenkins-ci/job/Cap-experimental/100/ and message: 'Build finished. '
Using context: continuous-integration/jenkin-ci/pr
Finished: SUCCESS
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